KEGG T01581: Atc

Acidithiobacillus caldus: Atc_1121

Entry

Atc_1121 CDS T01581

Definition

exodeoxyribonuclease V subunit alpha

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

acu Acidithiobacillus caldus

Pathway

acu03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:acu03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 HHH_5 Viral_helicase1 AAA_11 Helicase_RecD HHH_2 DUF258 AAA_29 T2SE NTPase_1 AAA_16 AAA AAA_22 PIF1 DUF2075 AAA_28 AAA_17 NACHT MobB cobW UvrD-helicase MMR_HSR1 AAA_25 AAA_18 ABC_ATPase ArgK AAA_14 ABC_tran PhoH AAA_10 UvrD_C AAA_3 Arch_ATPase AAA_23 DEAD ATP_bind_1

Other DBs

NCBI-GI:

340781863

NCBI-GeneID:

10988906

UniProt:

F9ZLM0

Position

1120679..1122862

AA seq 727 aa
MTKPRPPQTDAPDELLGGLIERVTFHNEGNGFCVLRVKARGHRELVTVVGHAAAVTAGEW
ITASGMWVTDRDHGQQFKAAFLKTSAPTSLEGIEKYLGSGMIRGIGPVYAKKLVRAFGDQ
VFTVIEEQPERLAEVEGIGPIRRERMVSAWADQKVIREIMLFLHAHGVGTARAVRIFKTY
GTDAVRILSENPYRLARDIQGIGFKTADAIAKKMGIEPQAPMRVRAGIAYALMEARDEGH
CGLPREALIPLAEKLLDVPTTAIESAIQEELLDGAIVADRVQDAECVFLASLYRNEQGIA
ELLHQLRTGPAPWADIAADTAIGWVQKRLGIALAQSQQSAIRMVLREKVALITGGPGVGK
TTLVNAILNILDAKRLRIALAAPTGRAAKRMSETTGKEAKTIHRLLEIDPQGGGFKRKED
YPLDIDLLVLDECSMIDVPLMHAILRALPRSAGLLMVGDPDQLPSVGPGQVLADLIAAKT
LPEVHLTEVFRQAAQSRIIQAAHRINAGHMPDLGKPEGQSDFYFIAVDDPAEAADKLVKL
VTTHIPRRFGLDPVQDIQVLCPMNRGALGARALNDALQAALNGESAPVVEKFGRRFAPGD
KVMQIQNDYEKEVFNGDLGTVHAVDMEEGTLTVDFEGRIVAYGFGELDLLQPAYAITVHK
SQGSEYPAVVIPMSTQHYPMLQRNLLYTAVTRGKALVVLLGQKKAVAMATRNGSRRRRWS
KLREWMR

NT seq 2184 nt +upstreamnt +downstreamnt
gtgaccaagccgcgccctccgcagacggacgcccccgatgaattgctcggtggattgatc
gagcgggtcaccttccacaacgagggtaatggattctgcgtactgcgggtcaaagcccgc
ggccatcgggaattggtcacggtggtcggacatgccgctgcggtcaccgcaggggaatgg
atcaccgcctcggggatgtgggtcaccgatcgggaccatggccagcaattcaaagcagcc
tttctgaaaacctctgcgccgaccagcctggaggggatagagaagtacctgggctcgggc
atgatccgcggaattggcccagtctacgccaaaaagctcgtaagagcctttggcgaccag
gtcttcaccgttatcgaagagcagccggaacgtctggccgaggtagagggcatcggcccc
attcgccgggaacgcatggtcagcgcctgggcggaccaaaaagtcattcgtgagatcatg
ctcttcctgcatgcccacggggtgggtaccgctcgggcggtgcggatcttcaaaacctac
ggtaccgatgccgtgcggatcctgtccgaaaacccgtatcgactggcccgggatatccag
ggcatcggcttcaaaaccgccgatgccatcgccaagaaaatgggcatagaacctcaggcc
ccgatgcgggtccgggcggggattgcctatgccctgatggaggcgcgggatgagggccac
tgcggattaccccgggaagcactcattccacttgccgaaaagctattggacgtcccgacg
acggccatcgaaagcgccattcaggaagagttgctggatggggcaatcgtcgccgatcgg
gtgcaggacgcggaatgcgtttttctcgcttcgctgtaccggaacgagcaggggatagcc
gagctcctgcaccaactccgtaccggtccggccccctgggcagacatagccgcggatacg
gcgatcggctgggtgcaaaagcgtttgggcattgcgctcgcgcagagccagcaatcggcc
atccgcatggtactccgggaaaaggtggccctcattaccggtggcccgggggtaggaaag
accaccctcgtcaatgccatcctgaacatcctcgacgccaagcgtctgcgcattgctctg
gccgcaccgactgggcgcgcggccaagcgcatgagcgaaactaccggcaaagaagccaag
acgatccaccggctcctggagatcgatccccagggagggggattcaagcgtaaggaggac
tatcccctcgatatcgatctgctggtcctggacgaatgctccatgatcgacgtgccgctg
atgcacgccatcctcagggctctaccccgcagcgcggggctcttgatggtcggggacccc
gatcagctgccctcggtggggcccggtcaggtattggccgatctcattgcggccaaaacc
cttcccgaggtccatctgacggaagtctttcgccaggcggcacagagccggatcatccag
gcagcccatcggatcaacgcgggccacatgccggacttgggtaaaccggaggggcagagc
gatttctacttcatcgccgtggacgatccagccgaggccgccgataaacttgtcaagttg
gtcaccacccatatcccgcgccgcttcggcctggacccagtgcaggacatccaggtgcta
tgccccatgaatcgcggcgcgctcggggctcgtgccctaaacgatgcgctgcaagctgcc
ctcaacggcgaaagtgcgccggtcgtcgaaaagtttggccgtcgcttcgcgcctggggac
aaggtcatgcagattcagaacgactacgagaaggaggtattcaacggcgatcttggcacc
gtacacgccgtggatatggaggagggcaccctaaccgtggatttcgaggggcgaatcgtc
gcctatggattcggcgaattggacctgctccagccggcctatgcgatcaccgttcacaaa
agccagggttcggagtaccctgccgtggtgatccccatgagcacgcagcattaccccatg
ctgcagcgtaatctgctgtacacggcggtgacgcggggcaaggccctggtcgtgctcttg
gggcagaagaaagccgtggccatggccacccggaatggttccaggcgacggcggtggtca
aagttgcgggaatggatgcggtag

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (39)   
   Pfam (39)   
All databases (48)   

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