KEGG   Anser cygnoides domesticus (swan goose): 106048280
Entry
106048280         CDS       T04896                                 
Symbol
PRPF19
Name
(RefSeq) pre-mRNA-processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
acyg  Anser cygnoides domesticus (swan goose)
Pathway
acyg03040  Spliceosome
acyg04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:acyg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106048280 (PRPF19)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    106048280 (PRPF19)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:acyg03041]
    106048280 (PRPF19)
   04121 Ubiquitin system [BR:acyg04121]
    106048280 (PRPF19)
   03400 DNA repair and recombination proteins [BR:acyg03400]
    106048280 (PRPF19)
Enzymes [BR:acyg01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106048280 (PRPF19)
Spliceosome [BR:acyg03041]
 Complex B
  Other components
   Prp19 complex
    106048280 (PRPF19)
 Complex C
   Prp19-CDC5 complex
    106048280 (PRPF19)
Ubiquitin system [BR:acyg04121]
 Ubiquitin ligases (E3)
  U-box type E3
   106048280 (PRPF19)
DNA repair and recombination proteins [BR:acyg03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    106048280 (PRPF19)
SSDB
Motif
Pfam: WD40 Prp19 ANAPC4_WD40 NBCH_WD40 U-box PROPPIN Cytochrom_D1 eIF2A Ge1_WD40 Nup160 RMC1_N DUF1830 zf-Nse GP3 ATG16 Cep57_MT_bd
Other DBs
NCBI-GeneID: 106048280
NCBI-ProteinID: XP_047909094
Position
Unknown
AA seq 519 aa
RYRYRCRYRCRCRAVTRALPTVSNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPVNNQ
PLSEEQLIDIKVAHPIRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSH
ALYQHDAACRVIARLTKEVTAAREALATLKPQAGLIVPQTVPSSQPNVAGAGESMDLGEL
AGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGIL
ALDLCPSDTNKILTGGADKNVIVFDKSSEQILATLKGHSKKVTSVVFHPSQELVFSASPD
ATIRIWSVPNASCVQVVRAHEGSVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVT
DESSGCALTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGY
YLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQW
TEILHFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYSL
NT seq 1560 nt   +upstreamnt  +downstreamnt
cggtaccggtaccggtgtcggtaccggtgtcggtgccgcgccgtgacccgcgccctcccc
acagtctccaacgaggtccccgagcacccatgcgtctcgcccgtctccaaccacgtctac
gagcggcggctgatcgagaagtacatcgcggagaacggcaccgaccccgtcaacaaccag
ccgctgtccgaggagcagctcatcgacatcaaggtcgcccacccgatccggcccaagccg
ccgtctgccacgagcatcccggccatcctgaaggcgctgcaggatgagtgggacgccgtc
atgctgcacagcttcaccctgcgccagcagctgcagaccacgcgccaggagctgtcccac
gcgctctaccagcacgacgccgcctgccgcgtcatcgctcggctcaccaaggaggtcact
gctgccagagaagctctggcgacgctgaaaccgcaggccggcctcatcgtgccccagacc
gtgccgtcctcccagcccaacgtggcgggagctggggagtccatggacctgggagagctc
gcaggcatgacccccgagatcatccagaagcttcaagacaaggccacggtgctgaccacg
gagcgtaagaagagaggcaagacggttccggaggagctggtgaagccggaggagctcagc
aagtaccggcaggtcgcctcgcatgtggggctgcacagtgccagcatcccggggatcctg
gccttggacctctgtccttccgacaccaacaagatcctcaccggcggggctgataaaaac
gtcatcgtctttgacaagagctcagagcagatcctggcgacgctcaagggccactccaag
aaggtcaccagcgtcgtgttccacccctcgcaggagctggtgttctcggcttctcccgat
gctaccatccggatctggtctgtgcccaacgcctcctgcgtgcaggttgtgcgtgcccac
gagggctccgtgaccgggctgagtctgcacgccacgggtgactacctcctcagctcttct
gatgaccagtactgggctttctcggacatccagaccggccgtgtcctcaccaaggtgaca
gatgagagctctggctgtgctctcacctgcgcccagttccacccggacgggctcattttt
ggaacagggacgatggactctcagatcaagatctgggatctgaaggaacgcaccaacgtg
gccaacttcccggggcactcgggccccatcaccagcatcgccttctctgagaacggctac
tacctggccacggctgcagacgactcttctgtcaagctctgggacttgcgtaagctcaag
aacttcaagacgctgcagctggacaataacttcgaggtgaagtcgctcatctttgaccag
agcggcacctacctggcgctgggcgggacagacgtccagatctacatctgcaagcagtgg
acggaaatcctccacttcaccgagcacagcggcctcaccacgggagtggctttcggccac
cacgccaagttcatcgcctcgacgggcatggaccggagcctcaagttctacagcctgtag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (16)   
   Pfam (16)   
All databases (31)   

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