KEGG T04896: 106049785

Anser cygnoides domesticus (swan goose): 106049785

Entry

106049785         CDS       T04896

Symbol

COL5A3

Name

(RefSeq) collagen alpha-3(V) chain

K19721

collagen type V/XI/XXIV/XXVII, alpha

Organism

acyg Anser cygnoides domesticus (swan goose)

Pathway

acyg04820

Cytoskeleton in muscle cells

Brite

KEGG Orthology (KO) [BR:acyg00001]
09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    106049785 (COL5A3)
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:acyg00536]
    106049785 (COL5A3)
Glycosaminoglycan binding proteins [BR:acyg00536]
Heparan sulfate / Heparin
  Extracellular matrix molecules
   106049785 (COL5A3)

SSDB

Motif

Pfam:

Collagen COLFI Laminin_G_2 Laminin_G_3 Laminin_G_1

Other DBs

NCBI-GeneID:

106049785

NCBI-ProteinID:

XP_047910866

Position

Unknown

AA seq 1830 aa
MRRRNLAAADRTLGPHSCLAPAPLWQDAGRGMGTRRRSPAKGTDVGGGGGPENPRGFSSR
PAAVPVDVLQTLGMKDGREGVAVTAGICTRRPGTEDPDFAFRVDNRTQLSAPTRQLFPDS
SFPEDFSILATVRARRGGQAFLLSVYDERGVQQLGVEVGRSPVFLYEDQDGHPAPERYPV
FRKVNLADGRWHRVALAVEGTNVSLLVDCHLLATLPLERGPRPVVSTEGVTLFGARLLDE
EVFEGDIQQLLIVPDPAAAHSYCQLYMPACDQPLLYPLLAPFPEESDPEPSAAPRRKGKK
GKGKGKRKGKGKKRRNKELQEQHEASEPSAVANQASAPTPTPLSVEDGSPPPVTSSLATT
VSVALNRTDPFEDAGEELVLESGEDGAAGAASAELPGYEDYYDGDPASPERFGPAEREET
VIQAPQEPSLKGDKGEPAVVEPDRRFEGPPGPPGPAGETGPLGPPGLPGLPGDPGEQGPA
GRPGLPGADGIRGPAGTMIMLPFQFGGDSLKGPTVSFQEAQAQAILQQAKLAMKGPPGPM
GLTGRPGPLGLPGHPGLKGDAGQRCHRLPLAPGGTEPFAPSLPPRLLMQGRAGADGARGL
PGDTGPKGDRGFDGLPGLPGEKGHRGDVGKPGPAGNPGEKGARGSDGLPGPRGQPGEPGM
RGLIGSRGSPGPPGPPGASGIDGAPGPKGNVGIQGEPGPPGQQGNPGPQGLPGPQGPVGL
PGDKGPPGKPGIQGVAGADGPPGHPGREGPAGEKGLQGPVGAPGPVGYPGPRGVKGAFGV
RGLKGSKGEKGEDGFPGFKGDMGPKGDRGDQGSLGPRGEDGPEGLKGQTGPMGEPGAAGP
AGEKGKLGVPGLPGYPGRQGPKGSAGFPGPVGLAGEKGKRGKAGQAGQTGQRGPPVSGRS
PGPELGVMGIAPGAVGKPSGAARTPQGPSWGRLYPTVTIVGSVISHRDHRGDGFIPHDHR
GGPAGKDGLPGHPGQRGEPGFHGKTGPPGPTGVVGPQGKLGETGPVGERGHPGPPGPPGE
QGLPGAAGREGAKGDPGPAGVAGKSGPPGVHGFPGTRGAPGETGPPGLKGGEGPPGPPGP
TGSPGERGPTGAAGGIGLPGRGGAQGPPGPLGEKGSPGERGPTGPAGHDGIQGPLGLPGP
PGPPGPAGEDGDKGEMGLPGQKGSKGDKGEAGPPGPPGIQGPIGHPGPAGADGEPGRRGQ
QGMFGQKGDEGSRGHPGLSGPPGLQGMPGPPGEKGENGDVGPMGPPGAPGPRGPQGPSGA
EGPQGMPGGVGQPGAVGEKGEPGEAGDPGAPGEPGPPGVKGDVGEKGDAGPSGAAGPPGK
KGPPGEDGAKGNLGPIGFPGDPGPPGDPGPPGLDGAVGEKGDGGDPGLPGPPGASGEPGP
PGPPGRRGPVGPVGREGRQGEKGAKGQPGTEGPPGKTGPVGAQGPPGRPGSEGLRGIPGP
AGEQGLLGAPGQAGPPGPLGPVGLPGLKGDPGHKGDKGHAGLIGLIGPPGEMGEKGDQGL
PGIQGPPGPKGDPGLAGPAGPTGPPGPPGLSGPLGQKGSKGSPGALGPRGDTGPPGPPGP
PGRPAELLEPLPSSRSGRHRRAAQGARGEQGTPPDYEGLEEVYASLSSLRTEVERLRRPL
GTPESPARVCKELQLCHPHLQDGEYWIDPNQGCSRDAFRVFCNFTAGGETCLFPDKKFEA
VRLAAWNREKPGTWYSTFRRGKKFSYVDADGNPVPVPQLTFLRLLSASARQNFTLTCQHA
AAWYDAPAASFARALRFRGANDEELGHDHPAAPVRALRDGCQERRGQERTVLEVSSSRVE
RLPLMDVAVADFGDANQKFGFELGPVCFVG

NT seq 5493 nt +upstreamnt +downstreamnt
atgcgccggaggaatctggcggccgcggaccggaccttgggcccacacagctgcctggca
ccggccccgctttggcaggacgcaggcagggggatggggacgcggcggaggtccccggct
aaaggcaccgatgtcgggggtggggggggtcccgaaaaccctcgggggttctcttctcgc
cccgcagccgtgcccgtggacgtgctgcagacgctgggcatgaaggacggccgggaaggc
gtcgccgtcaccgccgggatctgcacgcggcgccccggcaccgaggaccccgacttcgcc
ttccgcgtggacaaccgcacgcagctcagcgcgcccaccaggcagctcttccccgattcc
tccttccccgaggatttctccatcctggccacggtgcgtgcccggcgcggcggccaagcc
ttcctgctctccgtctacgacgagcgcggcgtgcagcagctgggggtggaggtcgggcgc
tcgcccgttttcctctacgaggaccaggacgggcacccggcccccgaacgctacccggtt
ttccgcaaggtgaacctggccgacggcaggtggcaccgcgtggcgctggccgtggagggc
accaacgtgtccctgctggtggactgccacctcctcgccacgctgccgctggagcgagga
ccccggcccgtcgtcagcaccgagggggtgacgcttttcggggcgcgcctgctggatgag
gaggtgttcgagggcgacatccagcagctgctgatcgtgccggaccccgcggccgcccac
tcctactgccagctctacatgccggcctgcgaccagcccctgctctacccgctcctggcc
cccttcccggaggagagcgacccggagcccagcgccgccccgcgtaggaagggcaagaag
ggcaaagggaaaggcaagcgcaaggggaaaggcaagaagaggaggaacaaggagctgcag
gagcagcacgaggcctccgagccctctgccgtggccaaccaggccagcgcgcccacgccg
acgccgctgtctgtggaggacggctccccgccgccggtcacctccagcctggccaccacc
gtgagcgtcgccctgaaccgcaccgaccccttcgaggacgctggcgaggagctcgtgctg
gaatccggggaggacggagccgctggggctgccagcgcggagctgccaggctacgaggac
tactacgacggggaccctgcgagcccggagcggttcggccccgccgagcgggaggagacg
gtgatccaggctccccaggagcccagcctgaagggggacaagggcgagccggccgtcgtg
gagccggatcggcgatttgaggggccgccgggacccccgggccctgcgggggaaacggga
cccctgggaccaccggggctcccagggctgcccggggaccccggagagcagggccccgcg
ggacggccggggctgccaggagccgacgggatccgcggcccggccgggaccatgatcatg
ctgccgttccagtttggcggagactccctcaagggccccaccgtctccttccaagaagcc
caagcccaggcgatcctgcagcaggcgaagcttgccatgaagggcccccccggccccatg
gggctcaccggccgtccgggcccgctgggtctgcccggacacccgggcctgaaaggggac
gcaggccaaaggtgccaccgactgcccctcgccccagggggcacggagcctttcgcccct
tccttaccccctcgcctcctcatgcagggtcgcgctggagcagatggtgccaggggtctc
ccgggggacaccggacccaagggtgaccggggcttcgatggcttgccggggctgccgggg
gagaagggccacaggggtgacgtggggaagccgggaccagcgggcaaccccggggagaaa
ggcgccaggggctcggatggcttgccgggaccgcgggggcaaccgggggaacccggcatg
cgagggctcatcggctcccgcggctcccccggccccccgggaccaccgggtgccagcggc
atcgacggcgcgccgggacccaagggcaacgtgggaatccaaggggagcctggccccccg
ggacagcaaggaaaccccggtccgcagggtctgcccggcccccagggccccgtcgggctg
ccaggggacaagggcccgccggggaagccaggaatccaaggggtggctggggccgacggg
cccccgggtcaccctggccgagaagggccggccggagagaagggcctccagggtcctgtg
ggtgccccaggtcccgtcggctatccaggaccccgtggggtgaagggagcttttggggtg
cggggcctgaagggcagcaaaggggagaagggtgaagacggattccctggcttcaagggg
gacatgggtcccaaaggcgacaggggcgaccagggctcgctgggtccccgcggcgaggac
ggccccgaggggctgaagggacagacgggtcccatgggggagccgggcgctgctggcccc
gcgggcgagaagggcaagctgggggtgccgggcctcccgggctaccccgggcgccagggc
cccaagggatccgccggcttcccgggtcccgtggggctggcaggagagaaaggcaagagg
ggcaaggctggccaggccgggcagacgggacagcgagggcccccggtgagcggccgcagc
cccggccccgagctgggggtgatggggatcgccccgggtgctgtcgggaagcccagtggg
gccgctcgtaccccacagggaccatcatggggccggttatatcccacagtgaccatcgtg
gggtcggttatatcccacagggaccaccgtggggatggttttatcccacatgaccatcgt
gggggccccgccgggaaggacggcttgccgggacacccggggcagcgcggcgagccggga
tttcacggcaaaaccggcccccccggccccacgggggtggtgggaccccagggtaaattg
ggcgaaacggggccggtgggcgagagggggcacccaggccctcctggcccccccggggag
caggggctgcctggggctgctggccgagaaggagccaagggagaccccggcccggctggc
gtcgccggtaagagcggccccccgggcgtccacggctttcccggcacgcggggggcaccc
ggagagacgggtcctcccggcctgaagggtggcgaaggcccccccggcccccccgggccc
acgggttcccccggcgagcgaggccccacgggggctgcgggaggcatcggcctgcccggc
cgtggcggggcacagggcccccccggccccctgggcgagaaggggtccccgggcgagcgg
ggtcccacgggtccggctgggcacgacgggatccagggccccctggggctgccggggccc
cccggtccccccggccccgctggagaggatggggacaagggcgagatggggcttcccgga
cagaagggcagcaaaggcgacaagggcgaggcgggccctccgggaccgccaggaatccag
ggacccatcgggcaccccggccctgcgggagcggacggggaaccggggcgccgcgggcag
caggggatgtttgggcagaaaggagatgagggatcgcggggtcaccccggcctgagcggc
ccccccggactgcagggcatgccaggccccccaggcgaaaagggcgaaaacggagacgtt
ggccccatgggaccccctggagcgccaggaccccgtgggccgcagggacccagcggtgcc
gagggtccccagggaatgccgggcggcgtggggcagccgggagccgtgggagaaaagggt
gagcccggtgaagccggggaccccggagcccctggggagcctggcccacccggcgtgaaa
ggagacgtgggggagaagggagacgcggggccgtcgggggcagccggaccccccggcaag
aagggccccccgggagaggatggagccaaaggcaacctgggtcccatcggcttcccaggg
gatcccggcccccccggagaccccggcccaccgggtctggacggggctgttggagagaag
ggggacggtggggaccccggcctgccgggtccgccaggcgcgtcaggggaaccggggccc
ccaggcccccccgggcggaggggacccgtggggcccgtggggcgcgagggccgtcagggc
gagaagggtgccaagggtcagcccggcaccgaggggccgcctgggaagacgggacccgtg
ggggcgcaggggcccccggggcggccgggctccgaagggttgcgggggatccctggcccc
gcgggcgagcaaggcctcctgggggcaccgggacaagcgggaccacccggccccctgggc
cccgtgggattgcccggcctcaagggagaccccggccacaagggagataagggccacgct
ggcttgattgggctcatcggaccgccgggggagatgggggagaaaggagaccaggggctc
ccgggcatccagggccccccgggacccaaaggagaccccggtttggctggccccgccggc
cccaccggcccccccggcccccccgggctctcgggtcccttgggccagaagggctccaaa
ggctcaccgggcgctctgggtccccgaggtgacacaggccccccagggcccccaggacca
ccgggccgcccggctgagctgctcgagccgctgccctcgagccggagcgggaggcaccgg
cgggcagcccagggggctcggggcgagcagggcacccccccggactacgaggggctggag
gaggtgtacgcctcgctcagctccctgcgcaccgaggtcgagcggctgcggcggcccctg
ggcacccccgagagccccgcgcgcgtctgcaaggagctgcagctctgccacccgcacctg
caggacggcgagtactggattgaccccaaccagggctgctcccgagacgccttcagggtt
ttctgcaacttcacagccggcggcgagacctgcctcttccccgacaagaagttcgaggcc
gtccgtctggctgcctggaaccgggagaagccggggacgtggtacagcaccttcaggagg
ggcaagaagttctcctacgtggacgcagacgggaacccggtgcccgtgccccagctcacc
ttcctgcgcctcctgagcgccagcgcccgccagaacttcacgctgacgtgccagcacgcc
gccgcctggtacgacgcccccgccgcctccttcgcccgcgccctgcgcttccgcggggcc
aacgacgaggagctgggccacgaccacccggccgcccccgtccgcgccctccgcgacggc
tgccaggaacgccgcggccaggagcggacggtgctggaggtgtcctcgtcccgcgtcgag
cggctgccgctgatggacgtggccgtggccgacttcggagacgccaaccagaaatttggc
ttcgagctgggccccgtctgcttcgtgggctga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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