KEGG   Acidithiobacillus caldus ATCC 51756: Acaty_c0328
Entry
Acaty_c0328       CDS       T03561                                 
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
acz  Acidithiobacillus caldus ATCC 51756
Pathway
acz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:acz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Acaty_c0328
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:acz03400]
    Acaty_c0328
Enzymes [BR:acz01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Acaty_c0328
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Acaty_c0328
DNA repair and recombination proteins [BR:acz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Acaty_c0328
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS NFACT_N zf-TFIIB zinc-ribbons_6 Zn_Tnp_IS1595
Other DBs
NCBI-ProteinID: AIA54218
UniProt: A0A059ZRS1
Position
339743..340639
AA seq 298 aa
MATRGPQSTWTLESGTQALHWAANWVHEVTMAELPEIELFRQKLRRNVLHKRLGLVQMRN
GKGEIQDDGAGLASDALKGREITDLYRYGQYLFWELDGREILVLQLGGELSVEVERGAPT
PAEGGDEPRAQLEIQINAHMRLRLQGTQLGNRLRLLDESSDVDFLTKLGPDPLLLPDGAR
SHLREALARRRSALRNVLLDDAFLPGLGPVWADEILFQAGLRPDRTVPTLTEEERERLLE
QIARVIERALRSQAKVPLLPKTFLTRHREDGHCPGCGGALETLSVGGRNALFCPACQH
NT seq 897 nt   +upstreamnt  +downstreamnt
atggcaacgcgcggaccacagagcacctggactttggaaagcgggacgcaggcgctacac
tgggccgcgaactgggtgcacgaggtcactatggcagaattaccagaaatagaactgttc
cggcagaagctgcgacgcaacgtgctgcacaagcgactcgggctcgtgcagatgcgcaac
ggcaagggcgagatccaggacgacggtgccggccttgccagtgatgcgctcaaggggcgg
gagattaccgacctctaccgctatggtcagtatctcttttgggagctggacggtcgagaa
atcctggtgctgcaactggggggtgagctcagcgtggaggtggagcgcggcgcgccaacc
cccgccgaaggcggtgatgagccccgcgcacagctggagatccagatcaacgcccacatg
cgcctgcgtttgcagggtacgcaactgggtaaccgactgcggctgctggacgagagctcc
gatgtggattttctgacaaagctggggccggatcccttgctgcttccggatggtgcccgc
agtcacctgcgcgaggccctggctcggcggcgcagcgccctgcgtaacgtcctcctggac
gatgccttcctcccggggcttggtcccgtctgggccgatgagattctgttccaggcgggt
ctgcgcccggatcgaaccgtgccgacgctcactgaggaggagcgtgaacgcctgctggag
cagatcgccagggtcatcgagcgggccttgcgttcccaggccaaggtgccgcttttgccc
aaaaccttcctcacccgacaccgtgaagatggccattgtccgggctgtggcggagcactg
gagaccctgagcgtgggcgggcgcaacgcgctgttctgccccgcctgccagcactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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