KEGG   Acidithiobacillus caldus ATCC 51756: Acaty_c1683
Entry
Acaty_c1683       CDS       T03561                                 
Name
(GenBank) ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
acz  Acidithiobacillus caldus ATCC 51756
Pathway
acz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:acz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Acaty_c1683
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acz03019]
    Acaty_c1683
Enzymes [BR:acz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Acaty_c1683
Messenger RNA biogenesis [BR:acz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Acaty_c1683
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22
Other DBs
NCBI-ProteinID: AIA55543
UniProt: A0A059ZVQ6
Position
1717814..1719103
AA seq 429 aa
MDWRRQGAADPATEIPLTLFTELGLDPALCAAAVARGYEQATPIQARAIPEILKGHDILA
AAQTGTGKTAAFALPILHRLARDPVSSGPRPVRALILVPTRELAAQVEDNIRLYRGQMPV
RSLMLIGGVKIGPQMEQLRNGADIVVATPGRLLDHLQQRSLRLDRVETLVLDEADRMLDM
GFIRDIRRIIGMLPAKRQNLLFSATFSPEIRQLAEGLLHQPIAVEVTPANATVDSITQRV
IRVDQERKRDLLLHLMDAHQWHQVLIFTRTKHGADRLARQMEREGFSAMAIHGNKSQGAR
TRALAEFKSGSLRALVATDIAARGIDIQRLPRVVNFELPQVAEDYVHRIGRTGRAGEDGE
AVSLVSGEERSQLQAVERLLRRRFDLEQVPGFEAKGHGPDRGVGKPVPARGHSLAAQGSR
RPRRQAGAN
NT seq 1290 nt   +upstreamnt  +downstreamnt
gtggactggcgccgacaaggcgcggccgatcctgccacggagattcccttgacattgttt
accgaattggggctggacccggccctctgtgctgctgccgttgcccgcggttatgagcag
gccacacccatacaggcacgcgccatccccgagatcctgaagggtcacgacatcctcgcc
gctgcccagactggtacgggcaagaccgctgctttcgctctacccattctccatcgtctg
gcccgggatcctgtgagctccggtccgcgtcccgtgcgcgcgctgattctcgtgcccaca
cgagaattggcggcgcaggtagaagacaacatccggctctacagagggcaaatgcccgta
cgttccctgatgctcataggtggcgtcaagattggcccgcagatggagcagctacgcaac
ggtgccgatatcgtcgtggcgacccccggacgactgctggatcacctgcaacagcgcagc
ctgcgtctggatcgcgtcgagaccttggttctggacgaggccgatcgcatgctggatatg
ggcttcatccgcgatattcgtcgaattatcgggatgttgccggcaaaacggcaaaatcta
ctcttctcggccaccttttcgccagagattcggcaattggccgaaggactgttgcaccag
cccatcgccgttgaagtgacacccgccaacgccaccgtcgacagtattacccagcgggtg
attcgcgtagaccaggagcgcaaacgcgatctactgctgcacctgatggatgcacaccaa
tggcatcaggtgctgatctttacccgcaccaagcacggtgcggatcgactagcgcgtcag
atggagcgggagggtttttcggccatggccatccacggcaacaaaagccaaggagcccga
acccgcgcgctggccgaattcaagtcgggaagcctgcgcgcgctggtcgccaccgatatc
gccgcgcgcggcatcgatattcagcggttgccgcgggtggtcaacttcgagctaccgcag
gttgccgaggactacgtccatcgtatcggccgcacgggtcgggccggcgaagatggcgag
gccgtctccctggtcagtggcgaggagcgtagccagctccaggcggtcgagcggctgctg
cgtcgccgctttgacctggaacaggtgcctggattcgaggcaaaagggcacggcccggac
cgtggtgtcggcaagcccgtcccggcgcgtggtcacagtctggctgcccagggctccaga
cggccaagacgacaagccggcgctaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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