KEGG   Acidithiobacillus caldus ATCC 51756: Acaty_c2560
Entry
Acaty_c2560       CDS       T03561                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
acz  Acidithiobacillus caldus ATCC 51756
Pathway
acz03030  DNA replication
acz03410  Base excision repair
acz03420  Nucleotide excision repair
acz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:acz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Acaty_c2560
   03410 Base excision repair
    Acaty_c2560
   03420 Nucleotide excision repair
    Acaty_c2560
   03440 Homologous recombination
    Acaty_c2560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acz03032]
    Acaty_c2560
   03400 DNA repair and recombination proteins [BR:acz03400]
    Acaty_c2560
Enzymes [BR:acz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Acaty_c2560
DNA replication proteins [BR:acz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Acaty_c2560
DNA repair and recombination proteins [BR:acz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     Acaty_c2560
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Acaty_c2560
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AIA56404
UniProt: A0A059ZUB9
Position
2609877..2612561
AA seq 894 aa
MPTAPRILVDASSFLYRAFHALPDLRAPDGLPTGAILGVANMLRRLQREYPQSEIIVVFD
APGKTFRDALFDQYKAQRPPMPEEMRAQVELLHQWVRAMGLRLLVVPGVEADDVIGTLAR
ATPVQTPVIIATGDKDLTQLVDEHTTLMDTMKGTRTDLAEVRARFGVEPTQIADYLALVG
DKVDNIPGVPGAGPKTVAKWLQQYGDLDGILAHGQEIPGKVGESLRAVAEILPRSRELAR
IRCDVEIPPAEATPPDPATLRRLAERLGFQQWLKDLPEPSGPSTPSADPVRRENYRAIVH
REELARLLATLEQTERVAIDTETSSLDPHAAELVGFSLAWFEGDRTRAVYVPLGHREGKQ
IPRDVALALLGPWLEDGSKAKLAQNAKFDWQIFWAQGLRPRGLARDTLLESYVLDSTAAH
DLDSLAERYLQHRNISYAELTGKGRQARSFAAVDIASATAYAAEDAEVCLRVDAQMWPQI
RRHEGLARVFRDIEMPLVEVLARMEWAGVRIDVDVLKRLSEELDTRMATVESEAFAAAGQ
RFNLNSPKQIQTILFDKMGLPVLKKTPGGQPSTNEDVLAELAKQADLPRLILDYRGLAKL
KNTYADALPQMIQERTGRVHTHYHQAVAATGRLSSSDPNLQNIPVRSDLGRRIRQAFVAE
PGHLLISADYSQIELRIMAHLSGDAGLRQAFARGLDIHRATAAEVFAIPLEQVTPEQRRA
AKAINFGLIYGQTPYGLAQQLGVGQGEAKAYMERYFERYPGVREYMENTRRLARQQGYVE
TLFGRRLYLPEIRSQNPARRNYAERAAINAPMQGTAADLIKLAMIAVDAWLLAQTDHGRM
LLQVHDELILEVPEKAVDAACQMLREKMEGVAELAVPLTVGLGVGANWDAAHGD
NT seq 2685 nt   +upstreamnt  +downstreamnt
atgcccactgcgccacgcatcctggtggatgcctcgagctttctctatcgtgccttccac
gccctgcccgatctgcgcgcgcccgatggcctgcccacgggggccatcctgggggtggcc
aacatgctgcggcggctgcagcgggagtatccccagagcgagatcatcgtcgtcttcgat
gccccgggcaagaccttccgcgatgccctctttgatcagtacaaggcgcagcgtccgccc
atgcccgaggagatgcgtgcccaggtggaattactccaccagtgggtgcgcgccatggga
ctacgacttctggtcgttcccggcgtcgaggctgacgatgtcatcggcaccctcgcccgg
gcaacaccggtccagacacccgtcatcatcgccactggcgacaaggatctgacccagctc
gtggacgagcacaccaccctcatggacaccatgaagggaacccgcaccgatcttgccgag
gtgcgggcccgctttggggtcgagccaacccagattgccgactatctggccctggtgggc
gacaaggtggacaacattccgggcgtgcccggagccgggcccaagaccgttgccaagtgg
ctgcagcagtatggggacctggatgggatcctcgcccatgggcaggaaatacccggcaag
gtgggagaatccctccgtgccgttgccgagatcctgccgcgtagccgcgaactggcccgt
atccgctgcgatgtggagatccctcccgcagaggccacgccgcccgaccccgccaccttg
cggcgcctggccgaacgcctcggtttccagcaatggttgaaggatctgcccgagccgtcc
ggaccctctacccccagcgcggatcccgtgcgacgcgagaactaccgcgccatcgtccac
cgtgaggagctggcccggctcctcgccaccctggagcagaccgagcgcgtcgccatcgat
acggaaaccagctccctggacccccacgccgcagagctggtgggcttctccctggcctgg
ttcgaaggcgatcggactcgggccgtctacgtgcccctgggccaccgtgaaggcaaacag
atcccaagggatgtggcactggccctcctgggcccctggctcgaggacggcagcaaggcc
aagctcgcccagaatgccaagttcgactggcagattttttgggcccagggcttgcgacca
cgtggacttgcgcgcgataccctgctggagagctatgtcctggacagcacggcggcccac
gacctcgacagcctggcggagcgctacctgcagcaccgcaatatctcctacgccgagctg
acgggcaaaggccggcaggcgcgcagctttgccgccgtcgatatcgccagcgccacggcc
tacgccgccgaggatgccgaggtctgcctgcgggtggacgcccagatgtggccgcagatc
cgccgacacgagggtctcgcccgggtctttcgcgacatcgagatgcccctggtggaggtt
ctggcacgcatggagtgggcgggcgtacgcatcgacgtggatgtcctgaaaaggctgagc
gaggagctcgacacccgcatggccaccgtcgagtccgaggccttcgccgccgccggacag
cgcttcaacctcaactcccccaagcagatccagaccatccttttcgacaagatgggcctg
cccgtcctcaaaaaaaccccgggaggccagccctccaccaacgaggacgtcctggcggaa
ctggccaaacaggccgatctgccgcgcctcatcctcgactaccgcggcctggccaagctc
aagaacacctacgccgacgccctaccgcagatgatccaggagcgcactggtcgcgtgcac
acccattatcaccaagcagtggccgccactggacgcctgtcctccagcgatcccaacctg
cagaacatcccggtccgcagcgatctcggccggcgtatccgccaggctttcgtggccgag
cccgggcacctgctgatcagcgccgattactcccagatcgagctgcgcatcatggcccac
ctgtccggcgacgccggcctgcgccaggcctttgctcggggcctcgacattcaccgggcc
accgcggcagaggtctttgccattcccctggagcaggtgactcccgaacagcgacgcgcc
gccaaagccatcaattttggcctcatctacggccagacgccctatgggctggcacaacag
ctcggcgtcggccaaggggaggccaaggcctacatggaacgctatttcgaacgctacccc
ggggtccgggaatacatggaaaacacccgccgccttgcccgccagcaaggctatgtggag
accctgttcgggcgccgcctgtatctaccggaaatccgctcccagaatccggcgcggcgc
aattatgccgagcgcgcggccatcaacgcccccatgcagggaacggcggcagacctcatc
aagctcgccatgatcgccgtggacgcctggcttctggcgcagacggaccacggtcggatg
ctgctgcaggtgcacgacgagctgatcctggaggtcccggaaaaggcggtggatgcggct
tgccagatgctgcgggagaagatggaaggggtggcggaactggccgttccactcaccgtg
ggcctcggggtgggcgccaattgggacgccgcccacggcgactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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