KEGG T00326: Adeh

Anaeromyxobacter dehalogenans 2CP-C: Adeh_0884

Entry

Adeh_0884 CDS T00326

Definition

ATP dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

ade Anaeromyxobacter dehalogenans 2CP-C

Pathway

ade03410	Base excision repair
ade03420	Nucleotide excision repair
ade03430	Mismatch repair
ade03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:ade03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:ade03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:ade03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:ade03450]

SSDB

Motif

Pfam:

LigD_N DNA_ligase_A_M RNA_pol_L

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1021930..1024110

AA seq 726 aa
MRDPGRTPEPFGGRGPGDGEPGPARAFVVQKHAARRLHWDFRLELGGTLRSWAVPKGPSA
DPSDRRMAIEVEDHPVEYADFEGIIPAGNYGAGAVIVWDRGAWWPVGDPEDGLARGKLVF
RLRGHKLHGEWTLVRTRAAEGGKREWLLLKHRGDPFAGPGRPFPEASVLSGRTVEELAAG
TSRAEAAAREAARLGAPERPLPARGVAPMMPGARRPPFDRAGWIFEVAQGGQRVSARREG
MGAVLRTPGGEELAARFPEVALAVALLPADPVLDGELVVLDDDGRASPEALEARARAATG
AAAGAALERPATLFAFDLLALGGRDLRRLALADRKRLLAEVAPAVGAVRFAGHVERAGRA
LHREAERRGLPGVLARRAAAPYRAGRSADWVLVPAAAGPAPRRPPPGVRSRPPAAPRSRG
PERSVNVTHPEKVCFPEDGITRGDLLAYHRAIAPFMLPFLADRPLVLTRFPDGIHGRSFL
QEDAPAWRPSWLRAVPVHAEGGRAAEHLVVDDADGLAWLVNQGAIPFDVLAGRAGALERP
DWCVVELDAAGAPFAQVVRVARALHALCAAAGLPSHAKTAGERGLDVLVPLGGQLTHAQA
RTLAELLARTVEAELPGLATTARTAAARGGRVHLDCLRNGHGAAIPAPYTVLPRPGAPVS
TPLRWSEVNARLDPARFTVRTVPARAARLGADPLRPVLTERPDLLRALARLRARPGAAGR
RAARRP

NT seq 2181 nt +upstreamnt +downstreamnt
atgcgcgacccgggccggaccccggagccgttcggcggccgcgggcccggcgacggcgag
cccggcccggcgcgggcgttcgtggtgcagaagcacgcggcccggcggctccactgggac
ttccggctggagctgggcggcacgctgcggagctgggccgtgccgaagggcccgtccgcg
gatccgtccgaccgccgcatggcgatcgaggtcgaggaccaccccgtcgagtacgccgac
ttcgaggggatcatcccggcgggaaactacggcgccggggccgtgatcgtgtgggatcgc
ggcgcgtggtggccggtgggcgatcccgaggacgggctggcccgcggcaagctggtgttc
cggctgcgcggccacaagctgcacggagagtggacgctggtccggacccgcgccgcggag
ggcgggaagcgcgagtggctgctgctgaagcaccgcggcgacccgttcgccgggccgggg
cggccgttcccggaggcgtcggtgctctccggccgaacggtggaggagctcgcggccggg
acgagccgggccgaggcggccgcgcgcgaggccgcgcgcctcggcgcgccggagcgcccg
ctcccggcgcgaggggtggcgcccatgatgcccggcgcgcggcgcccgccgttcgaccgc
gcgggctggatcttcgaggtggcgcagggaggccagcgcgtgtcggcgcgccgcgagggc
atgggggcggtgctgcgcacgccggggggcgaggagctcgccgcgcgcttccccgaggtg
gcgctcgccgtggcgctcctgccggcggatccggtgctcgacggggagctggtcgtgctc
gacgacgacggacgcgcgtcgccggaggcgctggaggcgcgcgcccgggccgccacgggc
gcggccgcaggcgccgcgctggagcggccggcgaccctgttcgcgttcgacctgctggcg
ctgggcgggcgcgacctgcgccgcctggcgctcgcggatcgcaagcggctgctcgccgag
gtcgcgccggcggtcggggcggtgcgcttcgccggccacgtcgagcgggcggggcgcgcg
ctccaccgcgaggcggagcgccggggcctccccggcgtgctcgcccgccgcgccgcggcg
ccctaccgggcaggccgatccgccgactgggtcctcgtgccggccgctgcaggccctgcg
ccgcgccgcccgccgccgggcgtccggtcgaggccgccggccgcgccacgctcccgcggg
ccggaacgcagcgtgaacgtgacccacccggagaaggtctgcttcccggaggacgggatc
accaggggcgatctgctcgcctaccaccgggccatcgcgccgttcatgctgccgttcctg
gccgaccgtccgctggtgctcacccgcttcccggacggcatccacggccggagcttcctc
caggaggacgcgcccgcgtggcggccgtcctggctgcgcgcggtgccggtgcacgcggag
ggcggccgcgccgccgagcacctcgtggtggacgacgccgacggcctcgcctggctggtg
aaccagggggcgatccccttcgacgtgctggcgggccgcgcgggcgcgctggagcggccg
gactggtgcgtggtggagctcgacgcggccggcgcgccgttcgcgcaggtggtgcgggtg
gcgcgcgcgctccacgcgctctgcgccgccgccgggctgccgagccacgcgaagaccgcc
ggggagcgggggctcgacgtgctcgtcccgctcggcggccagctcacgcacgcgcaggcg
cggacgctggccgagctgctggcgcggacggtcgaggcggagctgcccgggctcgccacc
accgcccgcacggccgcggcgcgcggcggacgcgtgcacctcgactgcctgcggaacggc
cacggcgcggccatcccggcgccctacacggtcctgccgcggccgggcgcgccggtgtcc
acgccgctgcgctggagcgaggtgaacgcccgcctcgacccggcgcggttcaccgtccgg
accgttcccgcgcgcgcggcccggctcggcgcggatccgctccggcccgtcctgaccgag
cgccccgacctgctgcgcgcgctcgcgcgcctgcgggcgcggccgggtgcggccggccgg
cgcgccgctcgccggccttga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-ADE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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