KEGG   Acropora digitifera (stony coral): 107341840
Entry
107341840         CDS       T04352                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
adf  Acropora digitifera (stony coral)
Pathway
adf03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:adf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107341840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:adf03021]
    107341840
   03036 Chromosome and associated proteins [BR:adf03036]
    107341840
Transcription machinery [BR:adf03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     107341840
   Coactivators
    SAGA/TFTC/STAGA complex
     107341840
Chromosome and associated proteins [BR:adf03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     107341840
    STAGA complex
     107341840
    TFTC complex
     107341840
    SAGA complex
     107341840
    SLIK complex
     107341840
SSDB
Motif
Pfam: TFIID_NTD2 WD40 NBCH_WD40 ANAPC4_WD40 Cytochrom_D1 Nup160 Glyco_transf_88
Other DBs
NCBI-GeneID: 107341840
NCBI-ProteinID: XP_015762802
Position
Un
AA seq 685 aa
MAANAGATSKSNPSKKEKETLLAVLQFLKKNKLPETEKILRQEANCLDSLEELNLQTTPD
SEPDISSVLSAYNSDADPTRYEDYFSSLQAFVEKSLDVYKPELAMVLYPMFVHMYLELVY
KGSEKEAQSFFSCFRGSQEDYHEEDLCKLAAITRREHMKSNEFMGTLRSNKFVIRMSKDT
YQVLKKHLQDQQQELLLSLIQQHLHFDVFEGRPRNKQTIEATAGAVTGEATFEANKSKVY
YGIPPEPDLGVVIEDESEDDEDKDKPKVKTMTKQYWSGQNIIVFEGRPRNKQTIEATAGA
VTGEATFEANKSKVYYGIPPEPDLGVVIEDESEDDEDKDKPKKKKVKKDSNGPGKKKQEH
NPNAPPLNRQLPFPVMKDSDKLVKITLIREAGKRVRLGPDLLPSICFYSILNAHTSLNTV
SISEDSSLLSGGFEDSCVRVWSLTPKKLRMLKPPSELAQIDKEAEDVLERIMDHRTAVES
RRLIGHSGPVFSTSFNTDNSFLLSSSADRTGAVSATCRVAFHPNCNYVATGSCDRTVRLW
DLNTGSSVRFFTGHKGAIYSLSFSPDGRYLASSGVDKRILVWDLAEGTLLTELKGHSDTV
YSLRFSRDGNMLASGGVDNCVKLWDARAICNPDDDDLERDNENPASSKGVTYELGSYPTK
RTPVHSLHFTLRNLLLASGPFTPAS
NT seq 2058 nt   +upstreamnt  +downstreamnt
atggcggccaacgcgggtgcaacttctaagtcgaatccatcgaaaaaagaaaaagaaacc
ctgcttgctgtgctccagtttttaaagaagaataagttgcctgaaactgagaagatcctc
aggcaagaggccaactgtctcgattctttggaagaattaaatcttcagactactccggat
tccgagccagatatttcttcagttttatctgcttacaacagtgatgctgatccaactaga
tatgaggattactttagtagtttgcaagcttttgttgagaaatcccttgatgtatataag
cctgaattagctatggtcctgtatccaatgtttgttcacatgtatcttgagcttgtgtat
aaaggcagtgaaaaagaagcccagtctttcttttcttgttttcgtggaagtcaagaggat
taccatgaggaagatctatgtaaattggcagccatcactcgacgagaacacatgaaaagc
aatgaattcatgggaacattacggagtaacaagtttgtgatcaggatgtcaaaagatacc
tatcaagtactaaagaaacatttacaggaccaacagcaggagctacttctttcactaata
cagcaacatctccattttgatgtttttgaaggaagaccacgcaacaagcaaacaatagaa
gccacagctggggcagtcacaggggaggctacatttgaagctaacaagagcaaggtttat
tatgggattcctccagaaccagatcttggagtagtaatagaagatgaaagtgaggatgac
gaagataaagataagccaaaggtgaaaactatgactaaacaatattggtctggacagaac
atcattgtttttgaaggaagaccacgcaacaagcaaacaatagaagccacagctggggca
gtcacaggggaggctacatttgaagctaacaagagcaaggtttattatgggattcctcca
gaaccagatcttggagtagtaatagaagatgaaagtgaggatgacgaagataaagataag
ccaaagaaaaagaaagtcaagaaagattcaaatggaccaggcaaaaagaaacaggaacac
aacccaaacgctccaccactgaaccgccagttaccatttccagtcatgaaagacagtgac
aaattggtcaagataacgttgataagagaagctggaaaaagagtaagattaggtccagac
ctgctcccttccatttgcttctacagcatacttaatgcacatacaagtttgaacactgtc
agtatatcagaggactcaagtctattgtctggtgggtttgaagacagttgtgtacgagtg
tggagcctcactcccaagaaactccgtatgttaaaaccaccctcagaactcgcccaaatt
gacaaggaagcagaggatgttcttgaacgaataatggaccacaggactgccgtggaaagc
agacgtttaattggtcattcaggacctgtgttttctacaagtttcaacacagataactcc
ttccttctctcaagctctgccgatagaacaggtgcagtatcagcaacttgcagagtcgct
tttcatccaaactgcaactacgtagctaccggatcttgcgatcggaccgtgaggctctgg
gatctaaatactggcagctcggtccggtttttcaccggtcataagggagccatctattct
ctctcgttttctcccgacggacgttatctggcttcttcaggtgtcgacaagcgtatcctg
gtttgggacctggcagaagggacattattgacagagctgaaaggacattcagataccgtg
tactctctgcgttttagcagagatggaaacatgctcgcttcaggcggcgttgataactgt
gtgaagttatgggatgctcgcgccatttgcaatcctgacgatgacgatttagaaagagac
aacgaaaaccctgcctcgtccaaaggcgtaacttatgaacttggatcatatcctaccaag
aggacgccggtacacagcttgcacttcacgttacgaaacctgcttctggcgtccgggcct
ttcacaccggcttcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (41)   

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