KEGG   Aeromonas dhakensis: CK627_03710
Entry
CK627_03710       CDS       T05186                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
adh  Aeromonas dhakensis
Pathway
adh03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:adh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CK627_03710
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:adh03021]
    CK627_03710
   03400 DNA repair and recombination proteins [BR:adh03400]
    CK627_03710
Enzymes [BR:adh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CK627_03710
Transcription machinery [BR:adh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CK627_03710
DNA repair and recombination proteins [BR:adh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CK627_03710
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: ASX09947
Position
741547..741822
AA seq 91 aa
MARVTVEDAVKQVGNRFDLVLVAARRARQIAVQGKDPLVDEENDKPTVIALREIELGLVN
NQVMDTQDRYEQQEQEAAELAAVAAIAEGRG
NT seq 276 nt   +upstreamnt  +downstreamnt
atggcacgcgttactgtagaagatgctgtaaaacaggtaggtaaccgttttgacctggtg
ctggtcgccgcacgccgcgcccgtcaaatcgcggttcaaggcaaagatcccctggttgac
gaagagaacgacaagccgaccgtgatcgccctgcgtgagatcgaactgggtctggtgaac
aaccaggtgatggacacccaggaccgttacgagcagcaagagcaggaagccgccgagctg
gctgccgttgccgccatcgccgaaggtcgcggctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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