KEGG T03129: AURDEDRAFT

Auricularia subglabra: AURDEDRAFT_109804

Entry

AURDEDRAFT_109804 CDS       T03129

Name

(GenBank) hypothetical protein

K13192

RNA-binding protein 26

Organism

adl Auricularia subglabra

Brite

KEGG Orthology (KO) [BR:adl00001]
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:adl01009]
    AURDEDRAFT_109804
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adl03019]
    AURDEDRAFT_109804
   03041 Spliceosome [BR:adl03041]
    AURDEDRAFT_109804
Protein phosphatases and associated proteins [BR:adl01009]
Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     AURDEDRAFT_109804
Messenger RNA biogenesis [BR:adl03019]
Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     AURDEDRAFT_109804
Spliceosome [BR:adl03041]
Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    AURDEDRAFT_109804

SSDB

Motif

Pfam:

PWI zf-CCCH zf_CCCH_4 zf-CCCH_2 RRM_1 HAUS5 RRM_3 Hemolysin_N Phage_min_cap2 DUF6800

Other DBs

NCBI-ProteinID:

EJD55496

JGI:

109804

AA seq 740 aa
MPHLEPADVSHLRPWLVRTLEPICDADPQVLADYVLALLKHDASEAELRDMFSKQLADFL
EQEAPAFTEQLLAALRTKSYMPYAADAPLARSEDPGIPIPLDALVPPAAGQKRSAEGDDF
DRAPPKGPRLSSDGNFSRYGPGPSHSNGGAWRGGEQRGQGAGRGGYANGGANGRPQNDMS
QRGPRRGLCRDYHNLGYCARGALCPYSHGNDAVVPQMGFGAPPGAPPGMPFVPVMGAQFG
MPFAMAPGGAYDPTQAQMGMGNRHPGGEQVIQDLTPRPEGAPDGRPRPQNGGMRRQQYPA
DAQRGTFAGAQNFDDGSANARGPRKGENKTLVVEKIPPEHLSLEGVNTWFKRFGTVTNVA
IDAKGAKALVSFATPTEAHAAWKSEDAVFGNRFVKVFWHRPMAGHGAAGQKMLAASAPLI
TNITAKESPSSEEPSNGSLAPPAAATPALKKKPVDAAALASKQQLLERQIAEQKTLMARY
SSASSSEEKQQIMARLRQLKDEMKSEPAAPTPTADAEQKKKELLDKELEIVAAGTEAEGS
SSTTEALKAKLAKLREEAASLGITDPSAPAYPGSTFRGYRGRGRGGARGYYRGRGAVPMR
NMKLDNRPRKLIVKGTPGDDEALQTVRGYYDSMGQVESASTLPSGDIVISFSSRSFAEQA
FARPTSITGIGSVEVAWHSEAPSGVVPTASNEPQTDGGEDTLMKEEPEARSPRRDDDDDE
DMRRMHDDDWDDEDDRRRRR

NT seq 2223 nt +upstreamnt +downstreamnt
atgccacacttagaacccgcggacgtctcgcaccttcgcccatggctcgtcaggacgctc
gagcccatctgcgacgctgatccgcaggtgctcgccgattatgtgctcgcgctgctcaag
cacgatgcgtccgaggccgagctgcgcgacatgttctccaagcagctggccgactttctc
gagcaggaggctccggccttcacagaacaactcctagccgccctccgcacgaagtcttat
atgccctacgcagccgacgcgccattggcgcgctccgaagaccccggcatcccaatcccg
ctcgacgccctcgtaccccctgccgctggccaaaagcgttccgcggagggcgacgacttc
gaccgcgccccgcccaagggcccgcgtctcagctccgatggcaacttttcgcgctacggt
cccggtccttcgcacagcaacggcggtgcgtggagaggaggcgaacagcgcggtcagggc
gcgggacgcggtggctacgcgaatggaggcgccaacgggcgcccgcaaaacgacatgtcg
caacgcggcccacgaaggggtctttgcagggactatcacaatctcggatattgcgcgcga
ggcgcgctctgcccttacagccacggcaatgacgcggtggtacctcaaatgggcttcggc
gcccccccgggtgcgccgccgggcatgcctttcgtgcccgtcatgggcgcacaattcggg
atgccgttcgccatggctcctggtggggcgtatgatcccacgcaggcgcagatgggcatg
ggcaaccgtcacccaggtggcgagcaggtcatccaagacctcaccccgcgcccggaaggc
gcacccgatggccgccctcggccgcagaacggcggcatgcgtcgccagcaatatcctgcc
gatgcgcaacgagggacgttcgccggcgcgcagaacttcgacgacggctccgcaaacgcc
cgcggtccacgcaagggcgagaataaaacgcttgttgtggagaagattccgcccgagcac
ctatccttagagggtgtcaatacctggttcaagcgcttcggcacggtgacgaacgttgcc
atcgacgccaagggcgcgaaggccctggtcagcttcgcgacgccaacggaagcacacgcc
gcgtggaagtccgaggacgcggtgttcggcaaccgctttgtcaaagttttttggcaccgg
cccatggcgggacacggcgctgcgggccagaagatgcttgcagcgtccgcgccgctcatc
accaacatcacagccaaggagagcccgtcttcagaagaaccgagcaacggctctctcgcc
cctccggctgcagcgacccctgcgctgaaaaagaagcccgtggatgcggccgcgctggcg
tcgaagcagcagctcctggagcggcaaatcgccgagcagaagactctcatggcgcggtac
tcctctgcatcatcctcggaggagaagcagcagattatggcacgcctgcggcagctcaag
gatgaaatgaagagcgagcccgccgcgcccacgcccactgctgacgccgagcagaagaag
aaagagcttctcgacaaggagttggagatcgttgctgctggtaccgaggccgaagggtcg
agctctacgacggaggcattgaaggcaaaactggcgaagttgcgggaggaggccgccagc
ctggggatcacagacccctctgctccagcataccctggctcgaccttccgcggatatcgc
ggacggggcagaggcggcgctcgtggatattaccgtggtcgcggcgccgtacctatgcgc
aacatgaagctcgacaaccggcctcggaaactcatcgtcaaaggcacgcctggcgacgat
gaagccctgcagaccgtgcgcggctactatgatagcatgggtcaagtggagtcggcgagc
acgctgccctctggcgacatcgtcatctccttcagcagccgatctttcgcagaacaggcg
tttgcgcggccaaccagtatcactggtatcggctctgtcgaggtcgcctggcattccgag
gctccgagcggtgtggtgcccacagcgtcgaacgagccccaaacggatggcggcgaagat
acgctcatgaaggaggagccagaggctcgctcaccgcggcgcgacgacgatgacgatgaa
gacatgcggcgcatgcacgacgatgactgggacgacgaagacgaccgccgccgcagacga
tga

All links

Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   JGI (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (36)   

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