KEGG   Auricularia subglabra: AURDEDRAFT_159928
Entry
AURDEDRAFT_159928 CDS       T03129                                 
Name
(GenBank) hypothetical protein
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
adl  Auricularia subglabra
Pathway
adl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:adl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AURDEDRAFT_159928
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adl03019]
    AURDEDRAFT_159928
Messenger RNA biogenesis [BR:adl03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     AURDEDRAFT_159928
SSDB
Motif
Pfam: DNA_pol_A_exo1 PMC2NT HRDC
Other DBs
NCBI-ProteinID: EJD50781
JGI: 159928
AA seq 837 aa
MDGNSEAQTSSASFAAYQAQLQSAVLQPTKVALGLPKDLAFHRTLDRDFAQDIDQCSARV
LALANRLIKLAGTGDAGDAAAARDLDVLGGEEDAVDNFHMLVVDVMDKLLERADTCIDQH
LGVNKAAPAAVAVKANPGTVRGSESAPSGKATYSPLQKRPHIAGALDKRLLHDPTIHKPQ
LQFKPPVDNFATSWRPALSEKAHAKRPLEEDGMEVDSGLPYHPYRYEITHIEYADHMFEA
PELSPQKSFEAIPFTLVTTPHEFAQMLSKLRSAREMAVDLEHHSYRTYAGFLCLMQISTR
EEDWVVDLLAVREEVPKLAEVFADENIVKVFHGAESDIVWLQQDFSLYIVNLFDTYHASK
VLEFPKHSLASLLEAYTDFTPDKRYQLADWRIRPIPAEMLLYARSDTHFLLHIYDKLREL
LLQRSSGTADLIREVLRRSEETALRTYVLETYDTQRGSGANGWEILAKKWNKGLHGLPLA
VYKAVHEWRDTVARTTDESTRYVMGNSSLFKLADAQPTDMAQLTAALHPMSAIVRKRGKD
LLNVISRAVKDYQEPAAAPVHHEPQVNPFAIGSQSLPIDLTANQDAQRAHLWDFSNAVPA
ASARSSKLFGDDFSAGHASPSWRDYCKPSSSLFGGGAAQQSRQKEKQKQREQYLEVAAEI
HRSLLVAPKLPKFEPTVDDVPMGDTKPETRAAADGDYIPIPTAPEEIPFVPKDQRKTAAD
PNDGDEIVVVGRHKKRKRAVPKAEAEGAGASEASQEVDTARRKKAKKPAAAEVPEVEEFD
YSAAPNMLDEDAQPAERKSRKAKPPPKKTGSIEYGDFPKPPRARSDMKAGNISRTFR
NT seq 2514 nt   +upstreamnt  +downstreamnt
atggacggcaactccgaggcacaaacgagctccgcgtcgttcgccgcgtaccaggcgcag
ctgcaaagcgcggtgctccagccgacaaaggtcgcgctggggctgcccaaggacctcgcc
ttccaccgcacgctcgaccgagattttgcgcaggacatcgaccaatgctccgcgcgcgtg
ctcgcgctcgccaaccgcctcatcaagctcgccggtactggggacgctggcgacgctgcc
gctgcgcgggacctggacgtcctgggcggcgaggaggacgcggtggacaacttccacatg
ctcgtcgtcgacgttatggacaagctgctcgaacgcgcggacacgtgcattgaccagcat
ctgggcgtgaacaaggccgcgcctgccgctgtcgcggtcaaggcgaatcctggcacggtc
cgtggctccgagtccgcaccatctggcaaggcgacttatagcccgctccagaaacggcct
catattgcgggcgcactcgacaagaggctgctgcacgatcccaccatccacaagccacag
cttcagttcaagccacccgtcgacaattttgcgacgtcctggcggcctgcgctgagcgaa
aaagcgcacgcaaaacggcccttggaggaggacgggatggaggtcgacagcggcctaccg
tatcatccctaccgctacgaaataactcacatcgagtacgcggaccacatgttcgaagca
cccgagctgtcgccgcagaagtcattcgaggccattccgttcacactcgtcacgaccccg
cacgagttcgcgcagatgctctccaagttgcgcagtgcgcgcgaaatggccgtggacctc
gagcatcacagctaccgcacctacgccggctttctgtgtctgatgcagatcagtacacgc
gaggaggactgggtcgtcgacctattagccgtgcgcgaggaggtgccgaagctcgcggag
gtctttgcggacgagaatatcgtcaaggtgttccacggcgcggagagcgatatcgtgtgg
ctgcagcaggatttcagtctctacatcgtcaacctcttcgatacctatcacgcgtcaaaa
gtcttggaatttccgaaacactcactggcctcattgctcgaggcctacactgacttcact
cctgacaagcgctaccagttggcagattggcgcataaggcccattcccgcggagatgctt
ctttacgcccgctccgatacgcatttcttgctacatatttacgacaaactgcgcgaactc
ctgcttcagcgctcttccggtaccgcggacctcatccgcgaggtactgcgccgctcagag
gaaaccgcgctgcgtacatacgttctcgagacctacgacacgcagcgcggctccggcgcg
aacggatgggaaatcctggccaagaaatggaataaaggcctgcatggcctgccgctcgcg
gtctacaaagcggtgcacgagtggcgtgataccgtagctcgcacgacggacgagagtacc
agatacgtaatgggcaacagctcgcttttcaagctcgcggatgcgcaaccaaccgacatg
gcgcagctgacggccgcgctgcacccgatgagcgcgatcgtgcgcaagcgcggcaaggat
ctgctgaatgttatctcgcgagccgtcaaggactaccaggagcccgccgccgcgcccgtc
caccacgagccgcaggtcaacccttttgccattggcagccagagcctgcctatcgacctc
acagcgaaccaggacgcacagcgcgcgcacctgtgggacttcagcaatgcggtgcctgcc
gcgagcgccaggtcgtcgaagctatttggggacgatttctcggccgggcacgccagcccg
agttggagggattattgcaagccatcgagctcgctatttggtggtggtgccgcgcagcag
agtcgccaaaaggagaagcagaaacagcgcgagcagtacctcgaagtcgcggccgagatc
catcgttcgctgctggttgcgccgaaactgcccaagttcgagccaaccgtcgacgatgtg
ccgatgggcgatacaaagcctgaaaccagggcagcagcggacggggactacatccccatc
ccaacggcgcccgaggagattccgttcgtgcccaaggaccagcggaagacggcggcggat
ccgaacgatggtgacgaaatcgtcgtcgtcggccgccacaagaagcgcaagcgcgccgtg
cccaaggccgaggcagaaggtgcgggcgcgtcggaggcgtcgcaggaggtcgacactgcg
cggcggaagaaggcgaaaaagcccgcggcggcggaggtgccggaggtcgaggagttcgat
tactccgcggcgccgaacatgctcgacgaggacgcgcagcccgcggagcgcaagagcagg
aaggcgaagccgccaccgaaaaagacagggagtatcgagtatggcgatttcccgaagccg
ccgcgcgcaagaagcgacatgaaggctggcaacatctcacggacgttccgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   JGI (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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