KEGG   Alicycliphilus denitrificans BC: Alide_0205
Entry
Alide_0205        CDS       T01397                                 
Name
(GenBank) CRISPR-associated protein, Csn1 family
  KO
K09952  CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
Organism
adn  Alicycliphilus denitrificans BC
Brite
KEGG Orthology (KO) [BR:adn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:adn02048]
    Alide_0205
Prokaryotic defense system [BR:adn02048]
 CRISPR-Cas system
  Type II CRISPR-Cas system
   Type II signiture cas proteins
    Alide_0205
SSDB
Motif
Pfam: HNH_4 RuvC_III Cas9_a
Other DBs
NCBI-ProteinID: ADU97989
UniProt: A0AA86CUS2
Position
228371..231460
AA seq 1029 aa
MRSLRYRLALDLGSTSLGWALFRLDACNRPTAVIKAGVRIFSDGRNPKDGSSLAVTRRAA
RAMRRRRDRLLKRKTRMQAKLVEHGFFPADAGKRKALEQLNPYALRAKGLQEALLPGEFA
RALFHINQRRGFKSNRKTDKKDNDSGVLKKAIGQLRQQMAEQGSRTVGEYLWTRLQQGQG
VRARYREKPYTTEEGKKRIDKSYDLYIDRAMIEQEFDALWAAQAAFNPTLFHEAARADLK
DTLLHQRPLRPVKPGRCTLLPEEERAPLALPSTQRFRIHQEVNHLRLLDENLREVALTLA
QRDAVVTALETKAKLSFEQIRKLLKLSGSVQFNLEDAKRTELKGNATSAALARKELFGAA
WSGFDEALQDEIVWQLVTEEGEGALIAWLQTHTGVDEARAQAIVDVSLPEGYGNLSRKAL
ARIVPALRAAVITYDKAVQAAGFDHHSQLGFEYDASEVEDLVHPETGEIRSVFKQLPYYG
KALQRHVAFGSGKPEDPDEKRYGKIANPTVHIGLNQVRMVVNALIRRYGRPTEVVIELAR
DLKQSREQKVEAQRRQADNQRRNARIRRSIAEVLGIGEERVRGSDIQKWICWEELSFDAA
DRRCPYSGVQISAAMLLSDEVEVEHILPFSKTLDDSLNNRTVAMRQANRIKRNRTPWDAR
AEFEAQGWSYEDILQRAERMPLRKRYRFAPDGYERWLGDDKDFLARALNDTRYLSRVAAE
YLRLVCPGTRVIPGQLTALLRGKFGLNDVLGLDGEKNRNDHRHHAVDACVIGVTDQGLMQ
RFATASAQARGDGLTRLVDGMPMPWPTYRDHVERAVRHIWVSHRPDHGFEGAMMEETSYG
IRKDGSIKQRRKADGSAGREISNLIRIHEATQPLRHGVSADGQPLAYKGYVGGSNYCIEI
TVNDKGKWEGEVISTFRAYGVVRAGGMGRLRNPHEGQNGRKLIMRLVIGDSVRLEVDGAE
RTMRIVKISGSNGQIFMAPIHEANVDARNTDKQDAFTYTSKYAGSLQKAKTRRVTISPIG
EVRDPGFKG
NT seq 3090 nt   +upstreamnt  +downstreamnt
atgcggagtttgcgctaccgcctggcacttgatttgggatccacctcgttgggatgggcg
cttttccggctagacgcatgcaataggcccacggcggtcatcaaggctggcgtgcgcatt
ttcagcgatggccgcaatcccaaggacggctcttcgctcgccgtcacccgccgtgcggcc
cgggccatgcgccgccgccgcgaccggctgctcaagcgcaagacgcgcatgcaagccaag
ctggtggagcacggtttctttccggcagatgcgggcaaacgcaaggcgctggagcaactc
aatccttacgcgctgcgtgccaaagggctgcaagaagcattgctccccggagagttcgcg
cgagcgttattccatatcaaccagcgccgcggcttcaagagcaaccgcaagacggacaag
aaggataacgacagcggcgtgctcaagaaggccatcggccagttgcgccagcagatggcc
gaacaaggcagccgcacggtgggcgaatacctgtggacgcgactacagcaggggcagggc
gtgcgcgcacgctaccgcgagaagccttacaccaccgaggaaggcaagaagcgcatcgac
aagagctacgacctctacatcgaccgcgcgatgattgaacaggaattcgatgctctctgg
gccgcgcaggccgcattcaaccccacgctcttccacgaggcggcacgcgccgacttgaag
gacacgttgctgcatcagcgccccctgcgccccgtcaagccgggccgctgcacgctgctg
cccgaggaagagcgcgcgccgcttgcgctgccgagcacgcagcgcttccgtatccaccag
gaggtcaaccatctgcgcctgctggatgagaacctgcgcgaagtcgcactcactctggcg
cagcgcgatgccgtggtaactgcgctggaaaccaaggccaaactcagcttcgagcaaatc
cgcaagctgctcaaactctcgggcagcgtgcagttcaacctggaggatgccaagcgcacg
gagctcaaaggcaacgccacgagcgcggcactggcgcgcaaagagttgttcggtgccgcg
tggagcggattcgatgaagcgctgcaggacgaaatcgtctggcaactggtgaccgaggaa
ggcgagggcgcactgatcgcctggctgcagacacatactggcgtggacgaagccagggcg
caggccatcgtcgacgtgagcctgcccgagggctatggcaacctgagccgcaaggcgctc
gcgcgtatcgtgcctgcgctgcgcgccgctgtcatcacctacgacaaggcggtgcaggcc
gcgggcttcgaccaccatagccagttgggcttcgaatacgacgcgagcgaagtggaggac
ctggtgcatccggagacgggcgagatccgttccgtgttcaagcagttgccctattacggc
aaggcgctgcagcgccacgtggcctttggcagcggcaagcccgaggacccggatgagaag
cgctacggcaagatcgccaaccccacggtgcacatcggcctgaaccaggtacgcatggtg
gtcaatgcactgattcgccgttacggccggccgaccgaggtggtgatcgaactggcgcgc
gacctcaagcaaagccgtgagcagaaggtggaagcgcagcgccgccaagccgacaaccag
cggcgtaatgcgcgcattcgccggtctattgccgaggtgctgggcatcggcgaagagcgg
gtacgcggcagtgacatccagaaatggatctgttgggaagagctgagcttcgatgcggcc
gatcggcgctgcccctacagcggcgtgcagatcagcgccgccatgctgctgagcgatgag
gtggaggtcgagcacatcctgcctttttcgaagaccttggacgacagcctgaacaaccgc
accgtcgccatgcgccaggccaaccgcatcaagcgcaatcgcacgccgtgggatgcgcgt
gccgaattcgaggcacagggctggagctatgaagacatcctgcagcgtgccgagcgcatg
cccttgcgcaaacgctaccgcttcgcgcccgacggttacgagcgctggctgggcgatgac
aaggacttcctggcccgcgcgttgaacgacacgcgctacctctcgcgcgtggccgccgag
tatttgcggctggtatgccccggcacgcgcgtaattccaggccagctgacggcgttgttg
cgcggcaaattcggcctcaacgacgtgctgggcctggatggcgagaagaaccgcaacgac
caccggcaccatgccgtggatgcctgcgtgatcggcgtgacggatcaggggctgatgcag
cgtttcgccacggccagtgcccaggcgcgcggagacggcctcacgcgcctggtggacggc
atgcccatgccttggccgacctaccgcgaccatgtggagcgtgcagtgcgccatatctgg
gtgagccaccggcccgaccatggcttcgaaggcgcgatgatggaagagacctcctacggt
atccgtaaggacggctctatcaaacagcggcgcaaggctgacggcagcgccgggcgcgaa
atttccaacctgatccgaatccacgaggccacgcagcctttgcggcatggcgtgagcgcg
gatgggcagcctttggcctacaaaggctatgtgggggggagcaattactgcatcgagatc
acggtcaacgacaaaggcaagtgggagggggaggtgatctcgaccttccgggcctacggc
gtcgtgcgcgcgggaggaatggggcgcctgcgcaatcctcatgagggccagaacgggcgg
aaactgattatgcggctggtgatcggtgacagtgtgcggctggaggtggatggagcggag
cgcacgatgaggattgtcaagattagtgggagtaatgggcaaattttcatggcgcccatt
catgaggccaatgtggatgcccgaaataccgacaagcaagatgcctttacctacacctcc
aagtacgcgggctccttgcaaaaagccaaaacccgtcgcgtcaccatctcgcccattggc
gaagtgcgggatcccggtttcaagggctga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (39)   

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