KEGG   Alicycliphilus denitrificans BC: Alide_0986Help
Entry
Alide_0986        CDS       T01397                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
adn  Alicycliphilus denitrificans BC
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:adn00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Alide_0986
Enzymes [BR:adn01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Alide_0986
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Alide_0986
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
1046667..1047482
Genome map
AA seq 271 aa AA seqDB search
MPELPEVEVTRRGLADAIGGATIRAVALGKSLRWPLGLAPGELAGQRVLAVRRRGKYLLL
DLQQGLLLIHLGMSGSLRFAHGLPQRGPHDHFDMETDRGTLRLHDPRRFGAVVWAAGEDD
PQARKLLGTLGVEPLGEDFDFQAFHAALRASRMPIKQLLLAGRVVVGVGNIYACEVLFLA
RIRPTMRASAIGSQRARRLHGAIREVLARAVERGGSTLRDFSGVDGNAGHFQAEANVYGR
EGLPCRQCGTPVRLLRQGQRSTYFCPNCQRS
NT seq 816 nt NT seq  +upstreamnt  +downstreamnt
atgcctgagctgcccgaggtggaggtgacgcggcgcggccttgccgatgcgatcggcggt
gcgacgatacgtgcggtggcgctgggcaaatccctgcgctggccgctgggcctggcgccc
ggggaactggccgggcagcgggttctggccgtgcgccggcgcggcaagtatctgctgctg
gatctgcagcagggcctgctgctgatccacctgggcatgtcgggcagcctgcgctttgcc
cacggcctgccgcagcgcggcccgcacgaccacttcgacatggagacggaccgcggtacc
ctgcggctgcacgatccgcgccgcttcggcgccgtggtctgggcggccggcgaggacgac
ccgcaggcgcgcaagctgctcgggaccctgggggtggagccgctgggcgaggatttcgat
ttccaggcctttcatgcggctctgcgcgccagccgcatgcccatcaagcagctgctgctg
gcgggccgggtggtcgtcggcgtgggcaacatctacgcgtgcgaggtgctgtttctggcc
cgcatccggccgacgatgcgggccagcgccataggctcgcagcgcgcgcggcgcctgcat
ggcgcgatccgcgaggtgctggcgcgggccgtggagcgcggcggcagcacgctgcgggac
ttctctggcgtcgacggcaatgccgggcatttccaggctgaggccaacgtctatgggcgc
gagggcctgccctgcaggcaatgcggcacgcccgtgcgcctgctgcgccaggggcagcga
agcacttacttctgtccgaactgccagcggtcctag

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