KEGG T01397: Alide

Alicycliphilus denitrificans BC: Alide_1963

Entry

Alide_1963 CDS T01397

Definition

malate dehydrogenase

Orthology

K00024

malate dehydrogenase [EC:1.1.1.37]

Organism

adn Alicycliphilus denitrificans BC

Pathway

adn00020	Citrate cycle (TCA cycle)
adn00620	Pyruvate metabolism
adn00630	Glyoxylate and dicarboxylate metabolism
adn00680	Methane metabolism
adn01100	Metabolic pathways
adn01110	Biosynthesis of secondary metabolites
adn01120	Microbial metabolism in diverse environments

Module

adn_M00009	Citrate cycle (TCA cycle, Krebs cycle)
adn_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
adn_M00012	Glyoxylate cycle
adn_M00168	CAM (Crassulacean acid metabolism), dark

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:adn00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:adn00620]
Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:adn00630]
Metabolism; Energy metabolism; Methane metabolism [PATH:adn00680]

SSDB

Motif

Pfam:

Ldh_1_N Ldh_1_C

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

2030130..2031116

AA seq 328 aa
MSKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQNALKGVIMEL
EDCAFPLLAGIEAHSDPMTAFKDTDYALLVGARPRGPGMERADLLAANAQIFTAQGKALN
AVASRNVKVLVVGNPANTNAYIAMKSAPDLPRENFTAMLRLDHNRAASQIAAKIGCSVGD
IEKLCVWGNHSPTMYADYRFATVDGKSVKDAINDHDWNANVFLPTVGKRGAAIIAARGLS
SAASAANAAIDHMRDWALGTNGKWVTMGIPSNGEYGIPKDVMFGYPVTTEGGKYKIVEGL
PIDAFSQECINKTLAELQGEQDGVKHLL

NT seq 987 nt +upstreamnt +downstreamnt
atgagcaagaagcccgttcgcgtcgcagttaccggcgccgccggccaaatcggctacgcc
ctgctgtttcgcatcgcctccggcgaaatgctgggcaaggaccaacccgtcatcctgcag
ttgctggaaatccccgacgagaaggcacagaacgccctcaagggcgtgatcatggagctc
gaggactgcgccttcccgctgctggccggcatcgaggcccacagcgaccccatgactgcg
ttcaaggacaccgactacgccctgctggtcggcgcccgtccgcgtggccccggcatggag
cgcgccgacctgctggcagccaacgcgcagatcttcacggcccagggcaaggcgctgaac
gccgtggcctcgcgcaacgtcaaggtgctggtcgtgggcaaccccgccaacaccaacgcc
tacatcgccatgaagtcggcccccgatctgccgcgcgagaactttaccgccatgctgcgc
ctggaccacaaccgcgccgccagccagatcgccgccaagatcggctgctccgtgggcgac
atcgagaagctatgcgtctggggcaaccactcgcccaccatgtacgccgactaccgcttc
gccacggtggatggcaagtccgtcaaggacgccatcaacgaccatgactggaacgccaac
gtgttcctgcccaccgtgggcaagcgcggcgcggccatcatcgccgcgcgcggcttgtcg
tcggccgcctcggccgccaacgccgccatcgaccacatgcgcgactgggctctgggcacc
aacggcaagtgggtcaccatgggcatcccgtccaatggcgaatacggcattcccaaggat
gtcatgttcggctaccccgttaccaccgagggcggcaagtacaagatcgtcgaaggcctg
cccatcgacgccttctcgcaagagtgcatcaacaagaccctggccgagctgcagggcgag
caggacggcgtcaagcacctgctgtaa

All links

Pathway (11)   
   KEGG PATHWAY (7)   
   KEGG MODULE (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-ADN (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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