KEGG T01397: Alide

Alicycliphilus denitrificans BC: Alide_2685

Entry

Alide_2685 CDS T01397

Definition

DNA ligase (ATP) (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

adn Alicycliphilus denitrificans BC

Pathway

adn03410	Base excision repair
adn03420	Nucleotide excision repair
adn03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:adn03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:adn03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:adn03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_ligase_OB_2 DNA_ligase_A_M

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

2777674..2778588

AA seq 304 aa
MRPTLPGPLEGGHAPWCVFRMNRLPILRWQLWILIVLGCMAAHAAPPSPTLARRYHTGID
VTAYWVSEKYDGVRALWTGRQLLSRQGLPIRAPAWFTAGWPAEPLDGELWAGRGRFDAAQ
AAVAAAAPDDAQWRALRYMVFDLPAAPGGFGARLPTLQHAVAALGQPWVQAAPQWRVATR
AQLMGQLREHEKAGAEGLMLRRDDAPYRGGRSEDLLKLKSFEDAEGLVVGHVPGRGKYAG
QTGALLVAMPGGRRFRLGSGQPDALRRQPPPVGSVVTYRFNGTHASGLPRFARFWRVRAD
EPLN

NT seq 915 nt +upstreamnt +downstreamnt
atgcgccccaccctcccaggcccgctcgaaggcggccatgctccttggtgcgtttttcgc
atgaatcgcttgcccatcctgcgctggcagctatggattttgatagtcctcggctgcatg
gcggcccacgccgcgccgccctcccccacgctggcgcggcgttatcacaccggcatcgac
gtcaccgcctactgggtcagcgagaagtacgacggcgtgcgcgcgctgtggaccggccgg
cagctgctgagccgccagggcctgccgatacgcgcgcccgcctggttcaccgcgggctgg
cctgccgagccgctggacggcgagctctgggccgggcgcggccggttcgacgccgcgcag
gcggccgtggcggcggccgcgcccgatgacgcgcagtggcgcgcactgcgctacatggtg
ttcgatctgccggccgcgcccggcggtttcggcgcgcgcctgcccaccctgcagcacgcg
gtggccgcgctgggccagccctgggtgcaggccgcgccgcagtggcgcgtggccacccgt
gcgcagctgatggggcagctgcgcgagcacgagaaggccggcgccgagggtctgatgctg
cgcagggacgatgcgccctaccgcggcgggcgcagcgaggatctgctcaagctcaagtcg
ttcgaggacgccgaaggcctggtcgtgggccacgttcccggccggggcaagtacgcgggg
cagacgggcgcgctgctggtcgccatgcccggcggacggcgcttccgcctgggcagcggc
cagcccgatgcactgcgccgccagccgccgcccgtgggctcggtggtgacctaccgcttc
aacggcacgcacgcaagcgggctgccgcgcttcgcgcgcttctggcgcgtgcgcgcggac
gagccgctcaattag

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-ADN (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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