KEGG   Achromobacter denitrificans: APT56_04320
Entry
APT56_04320       CDS       T04244                                 
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
  KO
K15792  MurE/MurF fusion protein [EC:6.3.2.13 6.3.2.10]
Organism
adt  Achromobacter denitrificans
Pathway
adt00300  Lysine biosynthesis
adt00550  Peptidoglycan biosynthesis
adt01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:adt00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    APT56_04320
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    APT56_04320
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:adt01011]
    APT56_04320
Enzymes [BR:adt01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.10  UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
     APT56_04320
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     APT56_04320
Peptidoglycan biosynthesis and degradation proteins [BR:adt01011]
 Precursor biosynthesis
  Amino acid ligase
   APT56_04320
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase Peptidase_M55
Other DBs
NCBI-ProteinID: ALX82458
Position
957045..959909
AA seq 954 aa
MSAKGFLSSPAATVEQAVAWLHSRVSLTAHLKLDSREIEPGDVFVACPGLSSDGRLYIEK
ALALGASAVLFEAPATEAIEAAAAAGDTPMLPVTGLRALLGELGDTWYGRPSSTLAVVAV
TGTNGKTSSVQWIAHALGRNDKPCGTIGTLGAVLPDGQTLGGHLTTPDVLTVHRLLAAMR
DAGAKAVAMEASSIGIEQGRMDGVRVALAAYTNLTRDHLDYHGTMERYEAAKASLFRWPG
LSAAVVNADDEAGRRLIASLPSDLSVMGYSLSADPAIPAAMRARDLQATAQGQIFTLVSP
YGEAQIVTRLLGAHNVSNLLLVAGVLYKLGLPFAQIARELAATDPVDGRLQTVEPVAAST
QAHAGRGALVVVDYSHTPDSLARALMALRPVAQARAGRLVCVFGCGGDRDAGKRPEMGRI
AAELADHVVVSSDNPRSESPEAIVAQILAGIPASAAVEVQVDRARAIMQAIWASAPEDVV
LLAGKGHETYQEIAGEKLPFDDREWARLALLLPLVKGVSTDTRRIGAGELFVALVGENFD
AHNYLDQAAERGACAAVVAHAVPESSLPQLVLGDTRVALMRIGAAWRARFTLPVVAVTGS
NGKTTTKEMISAMLAGWRGETGRLATAGNLNNDIGVPLTLLRLRPEHRAAVFELGMNHPG
EIAQLAAIAAPSVALVTNAQREHQEFMHTVEAVALENGAAIAALPADGVAVYPGDEPYAA
IWDKLAAPRRALRFGLQPGLDVYAEQILADVDSTRCRVVTPVGNADLTLPVPGVHNLRNA
LAAIASAIAAGAPLDVAVRALAGFSPVAGRMQYKKLSDGTLLIDDTYNANPDSVRAAIDV
LARIAGTRVLVLGDMGEVGDNGPAMHEEVGNYARELGLDALITLGDASRAAAAAFGTGAH
ACASVDEVVAALRGLRASCVLIKGSRFMRMERVVTAFTSNDGQAAKGQGDNHAA
NT seq 2865 nt   +upstreamnt  +downstreamnt
atgagcgccaaaggcttcctctcatcccccgccgccacggtcgaacaagccgtggcgtgg
ttgcattcgcgcgtgtcgttgaccgcgcacctgaagctggactcccgcgagatcgagccg
ggcgacgtgttcgtcgcctgcccgggcctgtccagcgacggccgtctatatatagagaag
gcgttggcgctgggcgccagcgcggtgctgttcgaggcgcccgcgaccgaggccatcgag
gccgcggccgccgccggcgatacgccgatgctgccggtgaccggcttgcgcgccctgctg
ggcgagctgggcgacacctggtacgggcggccgtcgtcgaccctggccgtggtggccgtg
accggtaccaacggcaagacgtcgtcggtgcaatggatcgcccacgcgctgggccgcaac
gacaagccctgcggcaccattggcaccttgggcgccgtgctgccggacgggcagacgctg
ggcggccatctcacgaccccggacgtgctgaccgtgcaccgcctgctggccgccatgcgc
gacgccggcgccaaggcggtggcgatggaagcgtcttcgatcggcatcgagcagggccgc
atggatggcgtgcgggtggcgctggccgcctacaccaacctgacccgagatcacctcgac
tatcacggcacgatggaacgttacgaggcggccaaggccagcctgttccgctggcccggc
ctgagcgccgcggtggtcaatgccgatgacgaagccggacgccgcctgatcgcctcgctg
ccgtcggacctgtcggtgatgggctacagcctgagcgcggatcccgcgattcccgccgcg
atgcgcgcgcgcgacctgcaggccaccgcgcaagggcagatcttcacgctggtgtcgccg
tatggcgaggcccagatcgtgacgcgcctgctgggggcgcacaatgtttccaacctgctg
ctggtggcgggcgtgctgtacaagctgggcctgcccttcgcgcagatcgcgcgcgaactg
gccgcgaccgatccggtcgatggccgcctgcagaccgtggaaccggttgccgccagcacg
caggcccacgcgggccgtggcgcgctggtggtggtggattactcccacacccccgattcg
ctggcgcgcgcgttgatggccttgcgtccggtggcgcaggcgcgcgccggccgcctggtg
tgcgtgttcggttgcggcggcgaccgcgacgccggcaagcgccctgagatgggccgcatc
gccgccgaactcgcggaccacgtggtggtgtccagcgacaacccgcgcagcgagtcgccc
gaagcgatcgtggcgcagatcctggccggcattccggcgtcggcggcggtcgaggtgcag
gtcgaccgcgcccgcgccatcatgcaggccatctgggccagcgcgcccgaggatgttgtg
ctgctggcgggcaagggccacgaaacctatcaggagatcgccggcgagaagctgccgttc
gacgatcgcgagtgggcgcgcctggcgctgctgctgccgctggtcaagggcgtttccacg
gatacgcggcgcatcggcgctggcgagctgttcgtggcgctggtgggcgagaacttcgac
gcccacaactatctggatcaggccgccgaacgcggcgcctgcgccgcggtggtcgcgcac
gccgtgccggaatcgagcctgccgcaactggtgctgggcgatacccgcgtggcgctgatg
cgcatcggcgccgcctggcgggcccgctttacgctgccggtggtggcggtaacgggcagc
aacggcaagaccaccaccaaggaaatgatctcggccatgctggcgggttggcgtggcgag
acgggccgcctggccacggccggcaacctgaacaatgacatcggcgtgccgttgaccctg
ctgcgcctgcgtcccgaacatcgcgccgccgtgttcgaactcggcatgaaccatccgggc
gagatcgcgcaactggccgccatcgcggcgcccagcgtggcgctggtgaccaacgcgcag
cgcgagcaccaggaattcatgcacaccgtggaagcggtggcgctggaaaatggcgccgcc
atcgcggcgctgccggccgatggcgtggcggtctatccgggcgacgaaccctatgcggcg
atctgggacaagctggccgcgccgcgccgcgcgctgcgtttcggcctgcagcccggcctg
gatgtctatgccgagcagatcctggcggacgtcgattcgacgcgctgccgcgtggtgacg
ccggtgggcaatgccgacctgacgctgccggtgcccggtgtgcacaacctgcgcaacgcg
ctggcggcgatcgccagcgccatcgcggcgggggcgccgctggacgtggcggtgcgggcg
ctggccggtttcagcccggtcgccgggcgcatgcagtacaagaaattgagtgacggaacg
ttgctcatcgatgacacctacaatgccaatcccgactcggttcgcgcggccatcgatgtg
ctggcgcgtatcgccggcacccgcgtcctggtactgggtgacatgggcgaggtcggggac
aacggccccgccatgcatgaagaggtgggcaattacgcgcgcgagcttggcctcgacgcg
ctcatcacgctaggcgatgccagccgggcggccgcggccgcgttcggcacgggcgcgcac
gcctgcgcatcggtagacgaagtcgttgccgcattgcgcggcctgcgcgcgtcctgcgta
ttgataaagggatcgcgctttatgcgcatggagcgggtagtgacggcttttacttcgaat
gacgggcaagcggccaaggggcagggggacaaccatgctgcttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (26)   

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