KEGG   Achromobacter denitrificans: APT56_07250
Entry
APT56_07250       CDS       T04244                                 
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
adt  Achromobacter denitrificans
Pathway
adt00010  Glycolysis / Gluconeogenesis
adt00020  Citrate cycle (TCA cycle)
adt00260  Glycine, serine and threonine metabolism
adt00280  Valine, leucine and isoleucine degradation
adt00310  Lysine degradation
adt00380  Tryptophan metabolism
adt00620  Pyruvate metabolism
adt00630  Glyoxylate and dicarboxylate metabolism
adt00640  Propanoate metabolism
adt00785  Lipoic acid metabolism
adt01100  Metabolic pathways
adt01110  Biosynthesis of secondary metabolites
adt01120  Microbial metabolism in diverse environments
adt01200  Carbon metabolism
adt01210  2-Oxocarboxylic acid metabolism
adt01240  Biosynthesis of cofactors
Module
adt_M00009  Citrate cycle (TCA cycle, Krebs cycle)
adt_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
adt_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
adt_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
adt_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:adt00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    APT56_07250
   00020 Citrate cycle (TCA cycle)
    APT56_07250
   00620 Pyruvate metabolism
    APT56_07250
   00630 Glyoxylate and dicarboxylate metabolism
    APT56_07250
   00640 Propanoate metabolism
    APT56_07250
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    APT56_07250
   00280 Valine, leucine and isoleucine degradation
    APT56_07250
   00310 Lysine degradation
    APT56_07250
   00380 Tryptophan metabolism
    APT56_07250
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    APT56_07250
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:adt04147]
    APT56_07250
Enzymes [BR:adt01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     APT56_07250
Exosome [BR:adt04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   APT56_07250
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox AlaDh_PNT_C Pyr_redox_3 FAD_binding_2 FAD_oxidored GIDA NAD_binding_8 HI0933_like DAO 3HCDH_N FAD_binding_3 2-Hacid_dh_C Thi4 Lycopene_cycl zf-UBP
Other DBs
NCBI-ProteinID: ALX82984
Position
1623545..1624972
AA seq 475 aa
MSKQFDVVVIGAGPGGYIAAIRAAQLGMSVACIDAWQNGQGGPAPGGTCTNVGCIPSKAL
LQSSEHFEQANHHFAEHGIEVKGVSLKLDTLIGRKNSVVKQNNDGILYLFKKNKVTFFHG
KGAFAGQVEGGWAIKVTGTAEEDLVAKHVVVATGSSARELPGLPFDEKVVLSNDGALNIG
AVPKTLGVIGAGVIGLEMGSVWRRLGAEVTILEAMPEFLAAADQQVAKEALKAFTKQGLN
IQMGVKIGEIKATAKSVTVPYVDAKGAEQKLVVDKLIVSIGRVPYTGGLNADAVGLKLDE
RGFVAVDGDCKTNLPNVWAVGDVVRGPMLAHKAEEEGVAVAERIAGQHGHVNFDTVPWVI
YTSPEIAWVGKTEQQLKAEGREYKAGSFPFLANGRARALGDTTGFAKVIADAKTDEVLGV
HIVGPMASELISEAVTIMEFRGAAEDIARICHAHPTLSEAVKEAALAVDKRALNF
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgtccaaacaattcgacgtcgtcgtcatcggcgcgggccccggcggctatatcgccgcc
atccgcgccgcgcagctcggcatgtcggtggcttgcatcgacgcctggcagaatggccaa
ggcggcccggctcccggcggcacctgcaccaacgtcggctgcatcccgtccaaggcgctg
ctgcaatcgtccgaacacttcgagcaggccaaccaccacttcgccgagcacggcatcgaa
gtcaagggcgtcagcctgaagctcgacacgctgatcggccgcaagaactcggtggtcaag
cagaacaacgacggcatcctgtacctgttcaagaagaacaaggtcaccttcttccatggc
aagggcgcgttcgccggccaggtcgagggcggctgggccatcaaggtcaccggcaccgcc
gaggaagacctggttgccaagcacgtggtggtcgccaccggttcgtcggcgcgcgagctg
cccggcctgccgttcgatgaaaaggtcgtgctgtccaacgacggcgcgctgaacatcggc
gccgtgccgaagacgctgggcgtgatcggtgccggcgtgatcggcctggaaatgggcagc
gtgtggcgccgcctgggcgccgaagtcactatcctggaagcgatgccggagttcctggcc
gccgccgaccagcaggtggccaaggaagccctgaaggccttcaccaagcaaggcctgaac
atccagatgggtgtcaagatcggcgagatcaaggcgaccgccaagtcggtgaccgtgccc
tacgtcgacgccaagggcgccgagcagaagctggtggtggacaagctgatcgtctcgatc
ggccgcgtgccctacaccggtggcctgaacgccgatgccgtgggcctgaagctcgacgag
cgcggcttcgtcgccgtggacggcgactgcaagaccaacctgcccaacgtctgggcggtg
ggcgacgtggtgcgcggcccgatgctggcgcacaaggccgaggaagagggcgtggcggtt
gccgagcgcatcgccggccagcacggccacgtcaacttcgacaccgtgccgtgggtgatc
tacacctcgccggaaatcgcgtgggtcggcaagaccgagcagcagctcaaggccgaaggc
cgcgagtacaaggccggcagcttcccgttcctggccaacggccgcgcccgcgcgctgggc
gacaccaccggctttgccaaggtgatcgccgacgccaagaccgacgaggtcctgggcgtg
cacatcgtcggtccgatggcctcggaactgatctcggaagccgtgaccatcatggaattc
cgcggcgccgccgaagacatcgcccgcatctgccacgcgcatccgacgctgtcggaagcc
gtgaaggaagccgccctggccgttgacaagcgtgccttgaacttctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (17)   
   Pfam (17)   
All databases (85)   

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