KEGG   Achromobacter denitrificans: APT56_14925
Entry
APT56_14925       CDS       T04244                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
adt  Achromobacter denitrificans
Pathway
adt03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:adt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    APT56_14925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:adt03021]
    APT56_14925
   03400 DNA repair and recombination proteins [BR:adt03400]
    APT56_14925
Enzymes [BR:adt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     APT56_14925
Transcription machinery [BR:adt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     APT56_14925
DNA repair and recombination proteins [BR:adt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      APT56_14925
SSDB
Motif
Pfam: RNA_pol_Rpb6 PT-VENN
Other DBs
NCBI-ProteinID: ALX84365
Position
3339769..3339972
AA seq 67 aa
MARITVEDCLNQIPNRFKLTLAATYRARELAQGHAPRLDSKDKPTVTALREIAGGLTGAE
MLRKVPT
NT seq 204 nt   +upstreamnt  +downstreamnt
atggctcgcattaccgtcgaagactgtctgaatcagatccccaaccgtttcaagctcacg
ctggccgcgacctaccgcgcccgcgagctggcgcaaggccatgccccgcgcctggacagc
aaagacaagcccaccgtcacggccctgcgcgaaatcgcgggcggcctcaccggcgcggaa
atgctgcgtaaagttcccacctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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