KEGG   Arachis duranensis: 107491493
Entry
107491493         CDS       T04300                                 
Name
(RefSeq) regulator of nonsense transcripts UPF3
  KO
K14328  regulator of nonsense transcripts 3
Organism
adu  Arachis duranensis
Pathway
adu03013  Nucleocytoplasmic transport
adu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:adu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107491493
   03015 mRNA surveillance pathway
    107491493
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adu03019]
    107491493
Messenger RNA biogenesis [BR:adu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     107491493
   mRNA cycle factors
    P-body specific factors
     107491493
SSDB
Motif
Pfam: Smg4_UPF3 RRM_2 BRAP2
Other DBs
NCBI-GeneID: 107491493
NCBI-ProteinID: XP_015967817
UniProt: A0A6P4DG84
Position
5:107461030..107466543
AA seq 511 aa
MKVRSEREKTKVVIRHLPPSLTQSDLLHHIDNHFASRYNWFSFRPGNTSHKNQRNSRAYI
DFKSPDDVFEFAEFFDGHVFVNERGAQHKAIVEYAPSQRVPRPTTKKDGREGTIYKDPDY
LEFFKFIAKPPEHLLSAEIQLERKEAEQAGANKEGPIVTPLMEYVRQKRSVDIGAQAFPV
TTKGSRSARAAMRGKHGSGNTKRGLEKKKYVQKDNAKDATRKESKDKSAFTVVPRREDQS
ATSNIKGISELETLHGIEGPISGIPVTSDSGKKKILLLKGKQREIPITTEGVIKQQSIQS
GNSAGSTTAKQNQRREASGRLIRSILLNSEARQSQPSTATQHKIQILSSDNGKRPARSLE
SSKLNAEGDSKRSLDERHGLGSVGEKIEKRTRNKDRPDRGVWTPLRRSDVSHADNEQSPS
SLIQPTLPESEVKENVTAANRNGESLASLVGRSSTSVENGPQRNFTRRGVSHIGKDDVAV
SLGDGKASKKGGGGHGAHEKQVWVQKSSSGS
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgaaggtccgttcggaaagggaaaagacgaaagtggtgattaggcatttgcctccgtct
ctgactcaatctgatctcctccatcacatcgataatcacttcgcttctcgctacaattgg
ttttctttccgccccggcaacaccagccacaagaaccagaggaattctcgagcttatata
gacttcaagagtcctgacgatgtttttgagtttgctgagttctttgatggacatgttttt
gtcaacgagagaggtgcgcagcataaagcaatagtagagtatgcaccttctcagcgtgtt
ccaagaccaactacgaaaaaggatggtcgtgaagggactatatataaagatccagactac
cttgagttcttcaaattcattgcaaagcctcctgaacatcttctcagtgcagaaatacaa
ttggaaagaaaagaagctgagcaagctggggccaacaaggaaggacctattgtcacaccc
ttgatggaatatgttcgtcagaaacgttctgttgacattggtgcacaggctttcccagtc
accacaaaaggtagcagaagtgctagagctgctatgcgaggcaagcatggctcaggcaat
accaaacgaggcttggaaaagaaaaaatatgttcaaaaggacaatgcaaaggatgccact
cgaaaagagtccaaagacaagtcagccttcactgtggtcccccggcgagaggatcaatca
gctacttcgaatataaaaggaatatctgaacttgaaactttacacggcattgaaggtcca
atttctggaatcccggtgacttctgactcgggaaagaaaaagatccttcttctgaaagga
aaacaacgggaaattcctattaccactgagggtgtgataaagcagcaaagtatacaatct
ggaaattcagctggttcaactactgcaaaacagaaccagaggcgtgaagcaagtggaagg
ttgattaggagcatacttctaaatagtgaggctcgtcaaagtcaaccttcaactgcgacc
caacataagattcaaatcttaagttcagataatggtaagcgacctgctcgttctttggaa
agcagcaaacttaatgctgaaggggattccaaaagatctttggatgaaagacatggtttg
ggtagtgttggtgagaaaatagaaaaacgtacaagaaacaaggatagacctgaccgcggt
gtttggacacctcttcgtcgttctgatgtttcacatgctgataatgagcagtcaccatcc
tcattgatacagcctactcttcctgaatcagaggtaaaagaaaatgttactgctgcaaac
aggaatggggaatctttagcttccttagttggacgtagcagtacctctgttgagaatggt
cctcaaaggaattttactcgccgaggagtttcccatatagggaaggatgatgttgctgtc
agtttaggtgatgggaaggcatccaaaaaaggtggtggtgggcatggtgctcacgagaaa
caagtgtgggttcagaaatcatcttcagggtcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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