KEGG   Aeromonas salmonicida O23A: O23A_p3491
Entry
O23A_p3491        CDS       T04990                                 
Name
(GenBank) ATP-dependent DNA helicase UvrD
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
aeo  Aeromonas salmonicida O23A
Pathway
aeo03420  Nucleotide excision repair
aeo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aeo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    O23A_p3491
   03430 Mismatch repair
    O23A_p3491
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aeo03400]
    O23A_p3491
Enzymes [BR:aeo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     O23A_p3491
DNA repair and recombination proteins [BR:aeo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     O23A_p3491
   MMR (mismatch excision repair)
    Other MMR factors
     O23A_p3491
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor AAA_30 Viral_helicase1 AAA_12
Other DBs
NCBI-ProteinID: ARW84230
UniProt: A0A1Z1NU19
Position
complement(3686079..3688250)
AA seq 723 aa
MDVSTLLDGLNDKQRDAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMQVERCSPFSIIAV
TFTNKAAAEMRGRVEKVLGSMQRGMWIGTFHGIAHRLLRAHHLDAGLPQDFQILDSDDQY
RLIRRVIKALNLDEKHWAPRAVMSYINGKKDEGLRPGDIDLYGDPVTRTYQQIYKTYQET
CDRSGLVDFAELLLRAHELWLNKPHILEHYRDRFQNILVDEFQDTNGIQYAWLRMLAGDS
GKVMIVGDDDQSIYGWRGAKIENIQRFLTDYQGAETIRLEQNYRSTANILKAANCVIANN
SERLGKELWTEGAEGDPISLYAAFNEVDEARFVVGRLKDWKEKGGLLADCAILYRSNAQS
RVLEEALMQDAMPYRIYGGLRFFERQEIKDAMAYLRLINNRGDDASFERVVNTPTRGIGD
RTLEILRTNARDQGQNLWQSAKGLLNDKVLTGRAGNAVRGFVDLIDALEEQVGMLPLHQQ
ADIAIQNSGLKAMYLAEKGEKSQARVENLDELVTACRQYNRPDELEEMSDLSAFLAHAAL
ESGENQADEYADAVQLMTLHSAKGLEFPLVLLVGVEEGMFPSQQSTEESGRLEEERRLCY
VGMTRAMEKLYICYAESRRIYGREMFHKPSRFIREMPAECLEEIRLRTQVSRPTQYGRFS
QNEVQQSFDASGITLGQRVLHPKFGEGIVLNFEGVGQQSRVQIQFDEVGAKWLVTAYARL
EAL
NT seq 2172 nt   +upstreamnt  +downstreamnt
atggacgtttcaaccctgctcgacgggctcaacgacaagcaaagagacgcggtggcggcc
cctcgcagcaatctgctggtgctggcgggcgccggctcgggcaagacccgggtgctggtg
caccgtattgcctggctgatgcaggtggagcgttgctcacccttctccatcatagccgtg
acctttaccaacaaggcagcggccgagatgcgcggccgggtcgagaaggtgttgggcagc
atgcagcgcggcatgtggatcggcaccttccacggcatcgcccaccgtctgctgcgggct
caccatctggatgcgggtctgccgcaggatttccagatccttgactctgacgaccagtac
cggttgatccgccgcgtcatcaaggcgctcaacctggacgagaaacactgggccccccgc
gccgtgatgagctacatcaacggcaagaaggacgagggcttgcgccccggtgacatcgat
ctctacggcgaccccgtcacccgcacctatcagcagatctacaagacctatcaggagacc
tgcgatcgttccgggctggtggactttgccgaactcttgctgcgcgcccacgaactgtgg
ctcaacaagccccacatcctcgagcactaccgggatcgcttccagaacatactggtggac
gagtttcaggataccaacggcatccagtacgcctggctgcggatgctcgcaggcgacagc
ggcaaggtgatgatcgtcggcgacgatgaccagtccatctacggctggcgcggcgccaag
atagagaacatccagcgcttcctgaccgactatcagggggccgaaaccattcgcctcgag
cagaactaccgctccaccgccaatatcctcaaggccgccaactgcgttattgccaacaac
tcggagcggctcggcaaggagctgtggaccgagggggccgagggcgacccgatttccctc
tatgccgccttcaacgaggtggacgaagcccgcttcgtggtcggccgcctcaaggactgg
aaagagaagggcggcctcttggccgactgcgccatcctctatcgctccaacgcccagtcg
cgggtgctggaagaggcgctgatgcaggacgccatgccctaccgcatctacggcggcctg
cgcttcttcgaacggcaggaaatcaaagacgccatggcctacctgcggctgatcaacaac
cgtggcgacgatgccagcttcgagcgggtggtcaacactccgacccgtggcatcggcgat
cgcaccctggagatcctgcgcaccaacgcccgggatcaggggcagaacctctggcaatcg
gccaagggactgctcaatgacaaggtgctgaccggtcgcgcaggcaacgcagtgcgtggc
tttgtcgatctgatcgacgcgctggaagaacaggtcggcatgctgccgctgcaccagcag
gcggatatcgccatccagaattccggcctcaaggccatgtatctggcggaaaaaggcgag
aaatcccaggcacgggtagagaacctggacgaactggtcaccgcctgtcgtcaatacaac
cgcccggacgagctggaagagatgagcgatctctccgccttcctcgcccacgcggcgctg
gagtccggtgagaatcaggcggacgagtacgccgacgctgtgcaactgatgacactgcac
agcgccaaggggctggagttcccgctggtgctgctggttggcgtggaagaagggatgttc
cccagccagcaatccaccgaggagtcgggccgcttggaagaggagcgccgcctctgttac
gttggcatgacccgcgccatggagaagctctacatctgttatgccgagagccgtcgcatc
tatggccgcgagatgttccacaagccgagccgctttattcgcgagatgccagccgaatgt
ctggaagagatccggctgcgcactcaggtgagcagacccacccagtacggccgcttcagc
cagaacgaggtgcagcagagcttcgacgccagcggcatcacgctcggccagcgggtgctg
catccgaaattcggggaagggatagtgctcaactttgaaggggtcggccagcagagtcgg
gtgcagatccagttcgacgaggtcggcgccaagtggctggtgacggcgtatgccagattg
gaagcgctctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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