KEGG T01378: Astex

Asticcacaulis excentricus: Astex_1225

Entry

Astex_1225 CDS T01378

Definition

glycoside hydrolase family 2 tim barrel

Orthology

K01190

beta-galactosidase [EC:3.2.1.23]

Organism

aex Asticcacaulis excentricus

Pathway

aex00052	Galactose metabolism
aex00511	Other glycan degradation
aex00600	Sphingolipid metabolism
aex01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:aex00052]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:aex00600]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:aex00511]

SSDB

Motif

Pfam:

Glyco_hydro_2_C Bgal_small_N Glyco_hydro_2_N Glyco_hydro_2 DUF1769 Bac_rhamnosid_N

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1:complement(1279990..1283112)

AA seq 1040 aa
MGSVAAGVMMLAAAPVLAQTAPVAEWEQPEVVAVNREPMKATFFNFESRDLALKGDKSAS
TRFLSLDGTWDFKFSKGVDNRPKDFYKAGANLSGWDKIQVPGMIQAQGDGKFGLPEFFNI
KYPFPANEPFIPHDMIEVGSYKRSFEVAADWTGQDVFLHIGAAGAAYYIWVNGEKVGYSE
DSKLPSEFNVTKFLKSGHNEIALEIYRYADGSYLEDQDFWRLSGIERSVYLYAEPKTRLR
DFTVRATLDKTYTDGVFALEAELAGQKGAATVTATVYDGETQVLKTTSKASVGKPAQLSG
TLKGVKAWTAETPNLYRLVIELTDAKGNLISATAKKIGFRTVEIRNGEVQVNGKRILIKG
VNRHEHDPKTYRVMTPELMRKDVELMKQANVNALRTSHYPNDPYLYDLADEYGLYIMDEA
NIESHEYMDTADRKAAQANDPKIREQIQLGYKPHWANAHLDRISRMVERDKNHPSIIFWS
LGNEAGTGPNFENAARWIRQNDPTRLISYLGHGTLYGDHQPNPYVDIYAPMYDDIDRIND
YAEDPRYAQPLIQCEYAHAMGNSLGNLEDYWVAIRAKKKLQGGFVWDFIDQFVDGTDSKG
RHYWASGFDVNPQRGDNSVVGDGLVQADRTPDPEYYELQKVYSPVTFEGAPQSGKVTVIN
RHNFRDLSGFDFTWTLLKDGVVADRGTLGGVNAAPDSSSDVALSLPALPQDGAEYIVTLA
AIAKNDSIRGVPAHSTVGWSQFVLRPASAAAEATAFVKPQQEGKAITLSAAGRTLSIDAD
TGLIALDSDGKTLLKGGTPNFWRGLTDNDEGANVARNHGIWKSLTENRRVRDLKVEADRV
QVLFVHGPGQVKVTVTYRLRTNGKVMVTTDFDPIKDDLPDPLRVGLRFDTDPSLANLEWY
GRGPQESYVDRQTGYAIGRYKGTVAEQFHDYARPQETGNKTEVRWIAVSDASGKGVKVTG
AQPLSANALAFPYEDLYARPRGEWRAADVTPRGDGTLLIDLAQIGVGGDTGWSQEARSLV
KYRIPLKPQTYSFTIETTVP

NT seq 3123 nt +upstreamnt +downstreamnt
atgggctcggtggcggcgggggtgatgatgctcgccgcagcgcccgtactggcgcaaacc
gcgcccgtggcggaatgggagcagcctgaggtggtggcggtgaaccgcgagccgatgaag
gcgaccttcttcaatttcgagagccgtgatcttgcgctgaagggcgacaaatcggcctca
acgcgctttttgtcgctggatggcacctgggatttcaaattctccaaaggtgtcgataat
cgcccgaaagatttctacaaagccggcgcgaacctgagcggctgggataagattcaggtc
cccggcatgattcaggcgcagggcgacggcaagttcggcctgccggaattcttcaatatc
aaatatcccttcccggcgaatgagcccttcatcccgcacgatatgatcgaggtgggctcg
tacaagcgtagcttcgaggtggccgcggattggaccggtcaggatgtgtttttgcatatc
ggcgcggcgggtgcggcctattacatctgggtcaatggcgagaaggtcggctattcggaa
gattctaagctgccgtccgaattcaatgtgacgaagttcctcaagtctggtcacaatgag
atcgcactggaaatctaccggtatgccgatggttcttaccttgaggatcaggacttctgg
cggctgtcggggattgagcgctcggtctatctttatgcggagcccaaaacgcgcctgcgc
gatttcacggtgcgcgccaccctcgacaagacctatacagacggcgtctttgcgctggag
gccgaactggcgggtcagaaaggtgcggccacagtgactgccaccgtctatgacggcgag
acgcaggtgctgaaaaccacgagcaaggccagtgtcggcaagcccgcgcaactgagcggc
acactcaagggcgtcaaggcgtggacggcggagacgcccaacctttaccggctggtgatc
gagctcaccgacgccaagggcaatctgatctcggccaccgcgaagaagatcggcttccgc
acggtggaaatccgcaatggcgaggtccaggtcaatggcaagcgcatcctgatcaaaggc
gtcaaccgccacgagcacgacccgaagacctaccgcgtcatgacgccggagctaatgcgc
aaggatgtcgagctgatgaagcaggccaatgtcaatgcgctgcgcacctcgcactatccc
aacgacccgtatctctacgacctcgctgacgaatatggcctctatatcatggacgaggcc
aatatcgagagccatgaatatatggacaccgccgacaggaaggcggcgcaggccaacgac
ccgaaaatccgcgagcagatccagctgggttacaagccgcactgggccaatgctcacctc
gaccgcatttctcgcatggttgaacgcgacaagaaccacccgtcgatcatcttctggtcg
ctcggcaatgaggcaggcaccgggccaaactttgaaaatgcggccaggtggattcgccag
aacgatccgacgcgcctgatctcctacttgggccatggcaccctgtacggcgatcatcag
cccaacccctatgtcgatatttacgcgccgatgtacgacgatatcgaccgcatcaacgac
tatgccgaagacccgcgctacgcccagccgctgatccagtgcgaatacgcccacgccatg
ggcaacagcctcggcaatcttgaagattactgggtcgccatccgcgccaaaaagaagctg
caaggcggcttcgtctgggacttcattgatcagttcgtggacggcacggactccaaaggc
cgtcactactgggcctcaggcttcgatgtgaacccgcaacgtggcgacaattcggtggtg
ggtgacgggttggtgcaggctgaccgtaccccggacccggaatattacgagcttcagaag
gtctattcgccggtcaccttcgaaggcgcaccgcagtcgggtaaggtcacggtcatcaac
cgtcacaatttccgtgacctgtcgggctttgactttacatggaccttgctgaaggacggc
gtggtcgccgatcgcggcacgctgggcggtgtcaatgccgcccctgactcgtcctccgac
gtggccctgtccctgccggccctgccgcaggacggtgcggaatacatcgtgacgctggcc
gccatcgccaagaacgacagcatccgcggcgtgccggcgcattcgacggtcggctggagc
cagtttgtgctgcgcccggcttcggccgcggcggaggctacggccttcgtcaaaccacag
caggagggcaaggccatcaccctcagcgccgccgggcgcacgctgagcatcgacgccgat
acgggcctgatcgcgctggacagcgacggcaagaccctgctcaaaggcggcacacccaac
ttctggcgcggcctgaccgacaatgacgaaggtgccaatgtggcgcgtaaccacggcatc
tggaaaagcctgaccgaaaaccgccgcgtgcgcgacctgaaggtcgaggctgaccgcgta
caggtgctgttcgtgcacggccccggtcaggtgaaggtcaccgtcacctaccgcctgcgc
accaacggcaaggtcatggtcaccaccgacttcgacccaatcaaggatgatctgcccgat
ccgctgcgcgttggtctgcgctttgacaccgatccgtctctggccaatctcgaatggtac
ggacgcggaccgcaggaatcgtacgttgatcgtcagaccggttacgccatcggtcgttat
aagggcacggtggccgagcagttccacgactatgcccgcccgcaggaaacgggcaacaag
accgaggtgcgctggatcgccgtctccgatgcttcaggtaagggcgtgaaggtgaccggg
gcccagcccctgagcgccaatgccctcgccttcccctatgaagacctctatgcccgcccg
cgcggggaatggcgtgccgctgacgtcacgccgcgtggtgacgggacgctgctgatcgac
ctggcccagatcggtgtcggcggcgataccggatggtcgcaggaggcgcgctcgctggtc
aagtaccgcatcccgctgaagccccagacctacagcttcaccatcgagacgacggtgcct
taa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-AEX (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (35)   

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