KEGG T01378: Astex

Asticcacaulis excentricus: Astex_3604

Entry

Astex_3604 CDS T01378

Definition

glycoside hydrolase family 2 TIM barrel

Orthology

K01190

beta-galactosidase [EC:3.2.1.23]

Organism

aex Asticcacaulis excentricus

Pathway

aex00052	Galactose metabolism
aex00511	Other glycan degradation
aex00600	Sphingolipid metabolism
aex01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:aex00052]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:aex00600]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:aex00511]

SSDB

Motif

Pfam:

Glyco_hydro_2_C Glyco_hydro_2_N Bgal_small_N Glyco_hydro_2 Bac_rhamnosid_N REGB_T4

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

pASTEX01:116128..119259

AA seq 1043 aa
MSYRPYALASVLTGLAMLVPVPSFAQTPPAQGTAEWEQPEVVAVNREPMKATFFNFESRD
LALKGDKSASTRFLSLDGTWDFKFSKGVDNRPKDFYKAGANLSGWDKIQVPGMIQAQGDG
KFGLPEFFNIKYPFPANEPFIPHDMIEVGSYKRSFEVAADWTGQDVFLHIGAAGAAYYIW
VNGEKVGYSEDSKLPSEFNVTKFLKPGHNEIALEIYRYADGSYLEDQDFWRLSGIERSVY
LYAEPKTRLRDFTVRATLDKTYTDGVFALEAELAGQKGAATVTATVYDGETPVLKTTSKA
SVGKPAQLSGTLKGVKAWTAETPNLYRLVIEVTDAKGNLISATAKKIGFRTVEIRNGEVQ
VNGKRILIKGVNRHEHDPKTYRVMTQELMRKDVELMKQANVNALRTSHYPNDPYLYDLAD
EYGLYIMDEANIESHEYMTLGRDTGDVSVQLGYKPHWAAAHLDRVSRMVERDKNHPSIIF
WSLGNETGVGPNFEAAAKWVRQTDPTRLISFLGYSALTEEHRPNAYVDIYAPMYDDIDRM
RDYAEDPQFTQPMIQTEYAHAMGNSLGNFADYWETIRAHKKLQGGFVWDWVDQYVYAKDA
RGRTYWASGFDLNPKHGDNSVIGDGVIKADRDPDPEYYELRHVQAPLAFSRDASGTVSVQ
NRHDFIDLSGYELRWELAVGGRRQTGGTLPTPVVKAGETKPLTLNLPDLPADGEAILTLR
ALSREGAVKGVPGGTELAFGQFILRPATPLPSLVVGGVQLSRTSEALSLKAATRQLTVDL
RTGLMRYDEAGRRLLSGGMPNFWRGLTDNDVGIGLAKSHADWKHYSTKRRLRGIDSGPDR
IKVRYALGEGGGRFDITYQMSADGQVDVTADFVPLKDDLPDPLRVGLRFDFDAALDGLNW
YGRGPWESYADRKTGAALGLYSASVRAQYHDYARPQESGNKTDVRWLSLSDAAGFGVRVS
GAQPLSVNALPFPYEDLYMRPQGTWKSSDIVPRGDGSLLVDITQAGVGGDTGWNSIGRPL
VKYRIPLQPVSYRFRLSANEKTN

NT seq 3132 nt +upstreamnt +downstreamnt
atgtcctatcgtccttatgcgctggcctcggttctcaccgggctggcgatgcttgtgcct
gtgccatcgtttgcacaaacgcccccagcgcaggggacggcagaatgggagcagcctgag
gtggtggcggtgaaccgcgagccgatgaaggcgaccttcttcaatttcgagagccgtgat
cttgcgctgaagggcgacaaatcggcctcaacgcgctttttgtcgctggatggcacctgg
gatttcaaattctccaaaggtgtcgataatcgcccgaaagatttctacaaagccggcgcg
aacctgagcggctgggataagattcaggtccccggcatgattcaggcgcagggcgacggc
aagttcggcctgccggaattcttcaatatcaaatatcccttcccggcgaatgagcccttc
atcccgcacgatatgatcgaggtgggctcgtacaagcgtagcttcgaggtggccgcggat
tggaccggtcaggatgtgtttttgcatatcggcgcggcgggtgcggcctattacatctgg
gtcaatggcgagaaggtcggctattcggaagattctaagctgccgtccgaattcaatgtg
acgaagttcctcaagcctggtcacaatgagatcgcgctggaaatctaccgctatgccgat
ggttcttaccttgaggatcaggacttctggcggctgtcggggattgagcgctcggtctat
ctttatgcggagcccaaaacgcgcctgcgcgatttcacggtgcgcgccaccctcgacaag
acctatacagacggcgtctttgcgctggaggccgaactggcgggtcagaaaggtgcggcc
acagtgaccgccaccgtctatgacggcgagacgccggtgctgaaaaccacgagcaaggcc
agtgtcggcaagcccgcgcaactgagcggcacactcaagggcgtcaaggcgtggacggcg
gagacgcccaacctttaccggctggtgatcgaggtcaccgacgccaagggcaatctgatc
tcggccaccgcgaagaagatcggcttccgcacggtggaaatccgcaatggcgaggtccag
gtcaatggcaagcgcatcctgatcaaaggcgtcaaccgccacgagcacgacccgaaaacc
taccgcgtcatgacgcaggagctaatgcgcaaggatgtcgagctgatgaagcaggccaat
gtcaatgcgctgcgcacctcgcactatcccaacgacccgtatctctacgacctcgctgac
gaatatggcctctatatcatggacgaggccaatatcgagagccatgaatatatgacgctg
ggccgggataccggcgatgtcagcgtgcagttgggctacaagccgcactgggccgccgcg
catctagatcgcgtcagccgtatggttgaacgcgacaagaaccacccgtcgatcatcttc
tggtcgctcggcaatgaaacgggggttggccccaatttcgaggccgcggcaaaatgggtg
cggcagactgatccgacgcgtctgatctccttcctcggctacagcgccctgaccgaagaa
cacaggcccaatgcgtatgtcgatatctatgcgccgatgtatgacgatatcgatcggatg
cgcgactatgccgaagacccgcaattcacccagccgatgatccagacggaatatgcccat
gccatgggcaacagtctgggcaacttcgccgactactgggagacgatccgagcgcacaaa
aagcttcaggggggctttgtctgggactgggtcgatcagtatgtctatgccaaggacgcc
aggggtcgcacctattgggcgtctggtttcgaccttaaccccaaacacggcgataacagc
gtcatcggcgacggtgtgatcaaggccgaccgcgacccggaccccgaatattacgagttg
cgccacgttcaggccccgctggcctttagtcgtgatgcaagcggtacggtttctgtgcaa
aaccgtcacgatttcatagatttatcgggctatgaactgcgctgggaactggcggttggt
ggccgtagacagaccggcggtactctcccgacgcctgtggtcaaggcgggtgagacgaag
ccgctgacgctgaatctgcctgacctgcccgccgacggtgaagccatcctgactctgcga
gccctgtcgcgggagggggccgtcaaaggcgtgccaggtggtaccgaactggcttttggc
cagtttatcctccgcccggccacgcccctgccgtcgctagtggtgggcggcgttcagtta
tcgcgcacgtctgaggctttgtcgcttaaggcggcgacgcgacaattgacggtggacctg
cgcaccggcttgatgcgttacgacgaggcgggccgtcgccttcttagcggcgggatgccc
aatttctggcgcggcctgaccgataatgatgtcggcatcggccttgcaaaaagtcacgcc
gactggaagcattattccaccaagaggcgtctgcggggtatcgatagcggccccgaccgc
atcaaggtgcgctatgcgctgggtgaaggcggcgggcgctttgacattacctatcagatg
tccgccgatggtcaggtcgatgtcaccgctgattttgtgccgttaaaagacgatctgcct
gacccgctgcgcgtcggtctgcgcttcgatttcgatgcggcactggacgggctgaactgg
tacgggcgcgggccgtgggaaagctatgccgaccgcaagacgggcgcggcgctggggctc
tatagcgcatccgtgcgggcgcaatatcatgactatgcccgcccgcaggaatccggcaac
aagaccgatgtgcgctggctgagcctgtctgatgcagctggctttggtgtccgcgtcagc
ggagcgcagcccctgtcggtcaatgccctcccgttcccctatgaggacctctacatgcgc
ccccaaggcacatggaagtcctcagatatcgtgccgcgtggtgacgggtcgctgctggtc
gatatcactcaggccggggttggcggcgataccggctggaacagtattggacgcccgctt
gtgaaataccgcatccccttgcagccggtcagctatcgcttccgcctttcggctaatgaa
aagacgaattaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-AEX (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (35)   

Download RDF

DBGET integrated database retrieval system