KEGG   Alcaligenes faecalis ZD02: UZ73_00295
Entry
UZ73_00295        CDS       T04157                                 
Name
(GenBank) DNA polymerase III subunit delta'
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
afa  Alcaligenes faecalis ZD02
Pathway
afa03030  DNA replication
afa03430  Mismatch repair
afa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:afa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    UZ73_00295
   03430 Mismatch repair
    UZ73_00295
   03440 Homologous recombination
    UZ73_00295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:afa03032]
    UZ73_00295
   03400 DNA repair and recombination proteins [BR:afa03400]
    UZ73_00295
Enzymes [BR:afa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     UZ73_00295
DNA replication proteins [BR:afa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     UZ73_00295
DNA repair and recombination proteins [BR:afa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     UZ73_00295
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA AAA_16 AAA_33 nSTAND3
Other DBs
NCBI-ProteinID: ALO36826
Position
complement(59351..60400)
AA seq 349 aa
MSDSLTFLPWQIETAQSWLGNRERFAHAWLIHGLPGIGKTQFARAAAASLLCDQPVQGLA
CGQCQACQWVRGGNHPDLRLLRPDALALEEQGPDNQEGDLAKDSAARKNPSREIRVEQLR
QLQHWFNTATHRGGWRVAVLYPAQALNLVSANALLKVLEEPADRTVFLLVADAPDRLLPT
LVSRCRRLPLPAPDAQQSVQWLEQQGVDQASDWLAAWGGAPLKALSASQDMNAPCPDWLS
AWMDGVLKAGREADLSLADTLEKLPAQEWIDHWQRLFVDIQLGGFAQPARYYPSLQKRID
ALAAQSNTTAVTEALKWLVQQKRLGNHPLNAKLFIHHALDRLHQACRRV
NT seq 1050 nt   +upstreamnt  +downstreamnt
gtgtctgatagtttgacttttctaccctggcagatcgagaccgcccaaagctggttgggc
aatcgggagcgttttgcccatgcctggctgatccacggtctgccgggcatcggcaagacg
caattcgcccgagcggccgcggccagtttattgtgcgaccagccggtgcagggtctggct
tgtggccaatgtcaggcctgtcagtgggtgcggggggggaatcaccccgatttgcgtctg
ctgcgcccggatgcgcttgctcttgaagaacaggggccagataaccaggaaggcgatctg
gccaaggattcagccgcccgtaaaaatccttcccgtgaaatccgggtggagcaattgcgt
cagttgcagcattggttcaatactgccacccatagagggggctggcgcgttgcggtgctg
tatccggctcaagccttgaatctggtatccgccaatgccttgctgaaggtgctggaagag
cccgcagatcgtacggtctttctgctggttgccgatgcaccagatcggctgctgcccaca
ctggtgtcgcgttgccgccgtttgcctttacccgcacccgatgcccagcaatcggtgcaa
tggctggagcaacaaggggtggatcaggcctcggactggttggctgcctggggcggggca
ccgctaaaagcgttgagtgccagccaggacatgaatgctccgtgtcccgattggctcagt
gcctggatggatggggtgctgaaagcgggtcgagaggcggacctgtccttggccgatacg
ctggaaaaactgcctgcccaagagtggatcgaccattggcagcgtttgtttgtcgatatt
cagctgggtggctttgcccaaccggcgcgttactatccttccctgcaaaaacgcattgat
gccttggccgcccaatccaacaccacagcggtgacggaagccctgaagtggctggtccag
caaaagaggctgggcaatcatccgctcaatgctaaattgtttattcatcatgccctggac
cgtttgcaccaggcatgtcgtcgtgtttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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