KEGG   Alcaligenes faecalis ZD02: UZ73_07705
Entry
UZ73_07705        CDS       T04157                                 
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
afa  Alcaligenes faecalis ZD02
Pathway
afa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:afa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    UZ73_07705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:afa03400]
    UZ73_07705
Enzymes [BR:afa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     UZ73_07705
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     UZ73_07705
DNA repair and recombination proteins [BR:afa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     UZ73_07705
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS zinc-ribbons_6 zf-TFIIB
Other DBs
NCBI-ProteinID: ALO38153
Position
1706781..1707608
AA seq 275 aa
MPELPEVETTRRGIATVIQGKNVRQFLVHEPRLRWPVPASLPQWIEGQAVQNCTRRGKYL
LLHFEQGVQIIHLGMSGSLRRVDLDEERRKHDHAEWIFDEARFLLHDPRRFGAILWHAHR
DGPLENHLLLRTLGVEPFDPLFTPEYLHRHLQGRRVAIKQALLGGKIVVGVGNIYASESL
FLAGIHPELPAGEVSLHRCEKLHSAILSTLQSALDSGGSTLRDYVNASGEPGAYFDIHAN
VYERVGKPCPRCQQPIKRIVQGQRATYYCSRCQRR
NT seq 828 nt   +upstreamnt  +downstreamnt
atgcctgaactgccagaagttgaaacaactcgtcgcggaattgcgacggttatccaggga
aaaaatgtccgacaattcctggttcacgagccccgtttgcgctggcccgtgcctgcctcc
ttgccgcaatggattgaaggccaggccgtccagaattgcacgcgtcgaggcaaatacttg
ttgttgcattttgaacaaggtgtccagatcatccatttaggaatgtccggctccttgcgt
cgtgtggatctggatgaagaacgccgcaagcatgatcatgcggaatggatctttgatgag
gcccgcttcctgctgcacgacccacgacgatttggtgcgatattatggcacgcccatagg
gacggcccgctggaaaaccaccttttgctacgtactttaggtgtagagcctttcgatccc
ttgttcacccccgagtatctgcaccgacacctgcaaggaaggcgcgtcgccatcaaacag
gccctgctgggcggcaagattgtggtgggagtcggcaatatctacgcttccgaatccttg
ttcctggccggtattcaccctgaactgcccgccggtgaagtttccttgcatcgctgcgaa
aaactgcactcggccatcctgagcaccttgcaatccgccctggactccgggggcagcacc
ttgcgcgattacgtcaatgccagtggtgaaccgggtgcctacttcgacattcacgccaat
gtctatgagcgtgtcggcaagccctgcccacgctgccaacagcctatcaaacggatcgtc
caaggccagcgcgcgacctattactgctcgcgctgccagcgccgctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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