KEGG   Alistipes finegoldii: Alfi_1952Help
Entry
Alfi_1952         CDS       T02133                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
afd  Alistipes finegoldii
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:afd00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Alfi_1952
Enzymes [BR:afd01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Alfi_1952
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Alfi_1952
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
2187132..2187962
Genome map
AA seq 276 aa AA seqDB search
MLEIPESYSFARQAADMLSGRTVTDVFNATHPHKFTWYLGDPADYRARLVGKTVRAAEGH
GAFIDMLLDDETHIALSDGVNLRYHAPGAEVPPKYQLLIAFDDDSFLVFTVAMYGGIIAF
RKNFDNPYYLGALSKPSPLDDAFDEACFGRLISDAKSNLSAKAFLATEQRIPGLGNGVLQ
DILFKSHIHPKRKLATLGDAELGRMYSSVKSTLRDMADRGGRDTEKDLLGKPGGYKTLLS
KNTFAEPCPGCGGAIVKEAYLGGAVYYCPVCQPLIK
NT seq 831 nt NT seq  +upstreamnt  +downstreamnt
atgctcgaaattcccgaatcttactcgtttgcacggcaagctgccgatatgctctccggc
cgcacggtcacggatgtattcaatgccacccatccccacaaatttacttggtacttggga
gatccggccgattaccgggcacgactcgtcggtaaaacggttcgtgccgccgaagggcac
ggagcattcatcgacatgcttctggacgatgagacgcatatcgctctttccgatggcgtc
aatctgcgttatcatgcgcccggagcggaggttccgccgaaatatcagcttctgatcgct
ttcgacgacgatagttttctggtttttacggtcgccatgtacggcgggatcatcgcattc
cggaagaatttcgacaatccgtattatctcggcgcactctcgaagccctctccgctggac
gacgctttcgatgaagcctgtttcggccggcttatctccgatgccaagtccaatttgtcg
gcaaaggcgttcttggcgacggaacagcgtattcccggactcggaaacggtgttttgcag
gatattttgttcaagtcgcatattcaccccaagcgcaagctggcgacgctgggtgatgca
gaactggggcggatgtattcatcggtgaaatcgaccctgagggatatggcggatcgcggc
ggacgcgatacggagaaagatttgctgggcaagcccggcgggtacaagaccctgctctct
aaaaacaccttcgcggagccttgtccgggctgcggcggtgcgattgtcaaggaggcttat
ctgggcggagccgtctattactgtcctgtctgtcagccgctgataaaatag

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