KEGG   Acidithiobacillus ferrooxidans ATCC 53993: Lferr_0002
Entry
Lferr_0002        CDS       T00758                                 
Name
(GenBank) DNA polymerase III, beta subunit
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
afe  Acidithiobacillus ferrooxidans ATCC 53993
Pathway
afe03030  DNA replication
afe03430  Mismatch repair
afe03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:afe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Lferr_0002
   03430 Mismatch repair
    Lferr_0002
   03440 Homologous recombination
    Lferr_0002
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:afe03032]
    Lferr_0002
   03400 DNA repair and recombination proteins [BR:afe03400]
    Lferr_0002
Enzymes [BR:afe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Lferr_0002
DNA replication proteins [BR:afe03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Lferr_0002
DNA repair and recombination proteins [BR:afe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Lferr_0002
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_2 DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: ACH82264
Position
1894..2991
AA seq 365 aa
MKITIDREDLLPILANMANIADRRPVQPILAHVLIEAAGQHCRFVATDLEVQLSADLDHP
VDAPGTCAVPARKLYDICRALPEHTPIEFHKDGEKLLLKAAKSRFTLHILPADQFPYLST
HSSLCQGNGNAKTFREALAVVANTMAQNDARLFLNGVLIEVEGQELRLVATDGHRLAMMT
LPFASSLESGSYQAILPRKAVLELLRILDDGDIVLEMSDASFLLNDGTQQFACKLIDAKY
PDYRRVIPQGHPRFAILDRQAFKSALQQSDVLVSDRNPTTHLHLENDQMTLRSRNEEQEE
GEIQIPVEYQGDTLDIAFNSRYLTDTTQIFPQESLRMRVKDSDSSAVFTPVDSNNPLYII
MPVRL
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgaaaatcaccatagatcgtgaagatcttctccccatcctggcgaatatggccaatatt
gccgaccggcgcccggtacaaccaattctggcccatgtccttatcgaagccgcaggccaa
cactgccgcttcgtcgctaccgatctggaagtccagctttccgccgacctggatcacccg
gtagatgcgccgggcacctgcgccgtccccgctcgcaaactctatgacatctgtcgggcg
ttacccgaacacacccccatagaatttcataaagacggcgaaaagctgctcctgaaggcc
gccaagagccgctttaccctgcacatattacccgccgatcaatttccgtacctcagtacc
cacagcagcctctgtcagggtaacggcaatgccaaaacctttcgcgaagcgctcgccgtc
gtcgccaacaccatggcacagaacgacgcaaggctttttctgaacggcgtcctcatcgag
gtggaaggtcaggagctgcgtctcgtagccaccgacggtcatcgtctggccatgatgacc
ctgccttttgccagcagcctggaaagcggaagctaccaggccatactgccgcgcaaagcc
gtcctcgaactactgcggattctcgatgacggcgacatcgttctggaaatgtcggatgcc
agctttctgctcaatgatggtacacagcagttcgcctgcaagctcatcgacgccaaatat
cccgattaccgccgggtcatcccccagggacacccccgcttcgccatactggaccgccag
gccttcaaaagtgccttgcagcagagcgacgttctggtcagcgaccgtaatccgaccacc
catcttcatctggaaaacgaccagatgaccctgcgcagccgcaatgaggagcaggaggaa
ggcgaaatccagattcccgtcgagtatcagggtgacaccctggatatcgctttcaacagc
cgctatctgacggacacgacccagatattcccccaggaaagtttgcggatgcgggtcaag
gacagcgacagcagcgccgttttcaccccggtagacagcaataatcccctgtatatcatc
atgcccgttcgtctttga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

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