KEGG   Acidithiobacillus ferrooxidans ATCC 53993: Lferr_0623Help
Entry
Lferr_0623        CDS       T00758                                 

Definition
DNA glycosylase/AP lyase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
afe  Acidithiobacillus ferrooxidans ATCC 53993
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:afe00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Lferr_0623
Enzymes [BR:afe01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Lferr_0623
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Lferr_0623
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
582475..583278
Genome map
AA seq 267 aa AA seqDB search
MAELPEIELLRQKLRRNILHKRVGVMQMQNAKGEALPDGAGIKDAALKGRAITDLHRYGQ
YLFLELDRKDILALQLGGELSGELERGPVHGEGGEEPRAALEIQINGQQRLRFQGTQLGN
RLRMLDENSDVDFLTKLGPDPLMVHGEGLGILREALSRRRSALRNILLDDTFAPGIGGIW
ADEILFQARLRPDRTATSLSEEERERFLEQIPKVLDRAVRCQAKTNLLPKTFLTRHREDG
HCPSCGGALETLSVGGKNAMLCPACQS
NT seq 804 nt NT seq  +upstreamnt  +downstreamnt
atggccgagttgccagaaatagaactgctcagacaaaagctgcggcgcaatatcctgcac
aagcgggtcggcgtcatgcagatgcagaatgccaagggcgaggcacttccggatggtgcc
ggcatcaaagatgccgcactcaaaggcagggccatcaccgacctgcatcgctacggtcaa
taccttttcctggaactggatcgcaaggacatcctcgccctgcagttgggtggtgagctg
agcggcgaactcgaacgcggccctgttcatggggaaggcggggaagagccgcgagcggca
ttggagatacagatcaacggccagcagcgcctgcgttttcaggggacccagttgggtaac
cgcctgcgcatgctggacgaaaacagcgatgtggacttcctcaccaagctcggccctgat
ccactgatggtgcatggggaagggcttggtatattgcgcgaggccctgagccgtcgccgc
agcgccctgcgcaacatcctgctggatgataccttcgcgccgggcatcggcggtatctgg
gcggatgaaatcctttttcaggcccgcctgcgaccggatcgcaccgcgaccagtctcagc
gaagaagagcgcgagcgtttcctggagcagatccccaaggtgctggatcgcgccgtgcgc
tgtcaggcgaagaccaacctgctgcccaagaccttcctcacccgccatcgggaagacggg
cactgcccgagttgcggcggcgcgctggagaccctttcggtggggggtaaaaacgcgatg
ctctgcccagcctgccagtcttga

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