KEGG   Acidithiobacillus ferrooxidans ATCC 53993: Lferr_2378Help
Entry
Lferr_2378        CDS       T00758                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
afe  Acidithiobacillus ferrooxidans ATCC 53993
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:afe00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Lferr_2378
Enzymes [BR:afe01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Lferr_2378
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Lferr_2378
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(2348763..2349575)
Genome map
AA seq 270 aa AA seqDB search
MPELPEVEVTRLGIAPHLRGRRLEGAVVRDSRLRLPVNDDLAARVSGQRLLNLRRRGKYL
LLDLERGTILIHLGMSGHLRVLPQSAPVQKHDHVDLLFADDLCLRFHDPRRFGAVLWLDD
ADHHPLLQHLGPEPLGDVFGAEYLYQRGRNRQIPVKSFLMDAHIVVGVGNIYANESLFAA
GIDPRRPAGRIALPRYMKLVQAVRTVLEAAIAQGGTTLRDFTRPDGGNGYFRLSLAVYGR
EGEPCTHCGAPLQGVRIGGRATIYCSQCQR
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgcccgagttgcccgaggtcgaagtcacccgtctgggtatcgctccccatctgcgggga
cggcgcctggagggggccgtggtgcgggacagccgcctgcgactgcccgtgaatgacgac
cttgcggcgcgggtgagcgggcagcgtctgctgaacctgcggcggcggggcaagtacttg
ctgctcgatctggaacggggaacgatcctgatccatctgggaatgagcgggcacctgcgc
gtcctcccccaaagcgcccccgtgcagaagcacgatcatgtcgatctgctgtttgcggac
gatctctgtctgcgctttcatgacccgcgccggtttggagccgtactctggcttgacgat
gccgaccaccatccccttctgcagcatctcgggccggaacccctgggcgatgtcttcggc
gcggagtacctttaccagcggggccgaaatcggcagataccggtcaaatccttcctcatg
gatgcccatatcgttgtgggcgtcggtaatatttacgccaatgaatcgctgtttgcggcg
ggtatcgatccacgccgtcctgcgggacggatcgccctgccgcgttacatgaaactggtg
caggcggtgcgcaccgtcctggaggccgccattgcccagggtggaacgaccttgcgtgat
tttacccgaccggatggcgggaatggatattttcgactatctctggcggtgtatggacga
gagggggagccttgtacacattgtggtgcgccgttacagggcgtccgcatcgggggccgg
gcgacgatctattgttcccaatgtcagcgctga

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