KEGG   Acidaminococcus fermentans: Acfer_0444Help
Entry
Acfer_0444        CDS       T01151                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
afn  Acidaminococcus fermentans
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:afn00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Acfer_0444
Enzymes [BR:afn01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Acfer_0444
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Acfer_0444
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
524773..525594
Genome map
AA seq 273 aa AA seqDB search
MPELPEVEQVRISLLPHIVGKTIEKVRVDLPKMILHPDPDAFARRLQGARFTGVRRRGKY
LGLELEGGDWLLVHLRMTGALLALPKDQQEPPYTRMAFFLSGRENLYFTDIRTFGVAALV
GEDGWRDKGYESLGPEPLEPALTAEYLRARAKGKTTVVKGFILDQSVIAGLGNIYADEAL
FAAGIRPTRRVNRLTRKEWEALTLGVRAVIHQGLEHHGTTFRNYQDADGKMGDNSRYLQV
YHRKGLPCRRCGTLLKQIKVAGRGSVYCPHCQK
NT seq 822 nt NT seq  +upstreamnt  +downstreamnt
atgccggaactgccggaagtggagcaggtgcggatcagcctgctgccccatattgtggga
aaaaccatcgaaaaggtccgggtggatctgcccaaaatgatcctccacccggatccggac
gcctttgcacgccggctccagggagcccggttcaccggtgtccggcgtcggggcaaatac
ctggggctggaactggaagggggcgactggctgctggtccatctccggatgaccggcgcc
ctgctggccctgcccaaggaccagcaggaaccgccctacacccggatggcctttttcctg
tccgggagggagaacctgtattttacggatatccggacctttggggtggccgctctggtg
ggagaggacggctggagggacaaggggtatgaaagcctgggaccggaacctctggaaccg
gccctcaccgcagagtacctccgggccagagccaaagggaaaaccacggtggtgaaaggg
ttcatcctggaccagtccgtgatcgccggcctggggaacatctatgcggatgaggccctg
ttcgccgccgggatccgacccacccgccgggtgaaccgcctgacccggaaggaatgggaa
gctctgaccctcggagtccgggcggtgatccatcagggactggagcatcacgggaccacc
ttccgaaactatcaggatgcggatgggaaaatgggggacaacagccggtatctccaggtg
taccaccggaaggggctgccctgccggcgctgcggcaccctgctgaaacagatcaaagtg
gccggacggggcagcgtatactgtccccactgccagaaataa

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