KEGG T01151: Acfer

Acidaminococcus fermentans: Acfer_1044

Entry

Acfer_1044 CDS T01151

Definition

ABC transporter

Orthology

K06147

ATP-binding cassette, subfamily B, bacterial

Organism

afn Acidaminococcus fermentans

Class

SSDB

Motif

Pfam:

ABC_membrane ABC_tran AAA_21 SMC_N DUF258 AAA_23 AAA_17 AAA_29 AAA_22 AAA_16 AAA_10 MMR_HSR1 Adeno_IVa2 AAA_25 AAA_33 AAA_14 AAA Zeta_toxin ATP-synt_ab MobB AAA_18 RNA_helicase AAA_24

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(1178370..1180112)

AA seq 580 aa
MGKEKNDSSWETLKKVWQIIDAYRLLLVGSLVLAGASVALQLYVPILFGRAIDGIAGPGK
VDFALVKGYTFQILVLVVLSSLATWAMNLINNKLAFNTVRDIRSRAIRQIQQLPLSFLDS
HSTGDLVQRVIADVDQISDGLLLGFTQLFSGLVTIVLTLYFMFSTHGKISLMVMVLTPVS
FLVARFIANRSYRLFQKQTAIRGKQTALINETVGNEKVVKAFRHEERSSRQFRGLNEDLQ
QATQGALFYSSLTNPSTRAVNNVIYALVALVGCWEILAGGLTVGGLTVLLYYANQYMKPF
TDISSVVTELQNALACAARVFALIEETPQSPDPDRQLTFQEGRLAIDHVYFSYNKKRPLI
EDFNFQVEPGQTTAIVGPTGCGKSTFINLLMRFYDVDRGTIAIDGQDTARVDRHSLRRTY
GMVLQETWLKQGTIRENIAFGKPEATEEEIIRAAKEAHSWEFIRRMPQGLDTVVSDDSLS
QGQKQLLCITRVMLALPPMLILDEATSSIDTRTEILIQNAFAKLMEGRTSFIVAHRLSTI
RNADRILVMKDGKIIEQGTHEKLMEQGGFYKDLYNSQFAG

NT seq 1743 nt +upstreamnt +downstreamnt
atgggcaaggaaaagaacgattccagttgggaaactctgaaaaaagtctggcagatcatc
gacgcctaccggctgctcctcgtggggagcctggtcctggccggggcttccgtggccctg
cagctgtatgtgcccatcctgttcggccgggccatcgacggcattgcagggccgggcaag
gtggatttcgctctggtaaaagggtacaccttccagatcctggtgctggtggtcctgtcc
agtctggccacctgggccatgaacctgatcaacaacaaactggccttcaacaccgtccgg
gatatccggagccgggctatccggcagatccagcagctgcccctttccttcctggacagc
cacagcaccggggacctggtccagcgggtgatcgccgatgtggaccagatctctgacggg
ctgctcctgggctttacccagctgttctccggtctggtgaccattgtactgaccctgtac
ttcatgttttccacccacgggaagatttccctgatggtgatggtgctgaccccggtcagc
tttctggtggcccggttcatcgccaaccggtcctaccggctgttccagaaacagaccgcc
atccgggggaaacagaccgctctcatcaacgaaaccgtgggcaatgaaaaggtggtcaag
gccttccgccatgaagaacggtcctccagacagttccggggcctgaacgaagacctgcag
caggccacccagggagccctgttttacagttccctgaccaacccctccacccgggcagtg
aacaatgtgatctatgccctggtggccctggtggggtgctgggagatcctggcgggaggg
ctcaccgtcggggggctcaccgtgctgctctattacgccaaccagtacatgaagcccttt
acggatatcagctccgtggtcaccgaactccagaatgccctggcctgtgccgcccgggtg
ttcgccctcatcgaggaaacgcctcagagcccggatccggaccggcagctgaccttccag
gaaggccggctggccatcgaccatgtgtatttttcctacaataaaaagcggccgctgatc
gaagacttcaacttccaggtggagccgggccagaccaccgccattgtggggcccaccggc
tgcggcaagagtaccttcatcaacctgctcatgcggttctatgatgtggatcgggggacc
attgccatcgacggccaggatacggcccgggtggaccgccattctctccggcggacctac
ggcatggtgctccaggaaacctggctgaagcaggggaccatccgggaaaacatcgccttt
ggaaaaccggaggctacggaagaagaaatcatccgggccgccaaagaagcccacagctgg
gaattcatccgccggatgccccagggactggatacggtggtgagcgatgacagcctgagc
cagggacagaaacaactgctgtgcatcacccgggtgatgctggccctgccgcccatgctg
atcctggacgaagccacctccagcatcgatacccggaccgagatcctgatccagaacgcc
tttgccaagctgatggaaggacgcaccagcttcatcgtggctcaccggctcagcaccatc
cgcaatgcggaccggatcctggtaatgaaagacgggaagatcatcgaacagggaacccac
gaaaaactgatggaacagggcgggttttacaaagacctgtacaacagccagttcgcaggg
tga

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-AFN (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (23)   
   Pfam (23)   
All databases (31)   

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