KEGG T00956: Afer

Acidimicrobium ferrooxidans DSM 10331: Afer_0599

Entry

Afer_0599 CDS T00956

Definition

D-alanine--D-alanine ligase (EC:6.3.2.4)

Orthology

K01921

D-alanine-D-alanine ligase [EC:6.3.2.4]

Organism

afo Acidimicrobium ferrooxidans DSM 10331

Pathway

afo00473	D-Alanine metabolism
afo00550	Peptidoglycan biosynthesis
afo01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:afo00473]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:afo00550]

SSDB

Motif

Pfam:

Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp_3

Other DBs

NCBI-GI:

256371402

NCBI-GeneID:

8322658

UniProt:

C7LXU5

Position

605094..606203

AA seq 369 aa
MATTRVGVCFGGPSPEHDISILTGLQALRALAESGGSPVAIYWSKEGSFYRVEPSLEAEA
YAGGVPAGARPLELVVGRDGGFVEPRGGLRPKRELLELDVVVNCCHGGPGEDGALQGALD
LAGVRYTGPSARTAALGMDKLAFASLLRHHGIACLPREDGRRVTFDGPYIAKPRFGGSSI
GIEVLEDRAQLEARMQRSEHFRDGMVVEPYRPDLMDVQVALRRFPTPTLSAIERPLRSAP
GEPILTYREKYQPIGGMATAPRELPAAIAPELAETIRSLALSVGELLDSRGVMRVDFLAS
TEGECYVNEVNTIPGSLSHYLFVEPKIPFAAQLEADIREALERATYRPNVAGADGSVLRS
AGSIAAKLA

NT seq 1110 nt +upstreamnt +downstreamnt
gtggccacgacgcgcgtcggcgtctgcttcggcggcccaagtcccgagcatgacatctcc
atcctcaccgggctgcaggcgctccgcgcgctggccgagagcggtgggtcaccggtcgcg
atctactggtcgaaggaggggtcgttctaccgcgtcgagccctccctcgaggccgaggcc
tacgcgggcggggtcccggcgggggcgagaccgctcgagctcgtcgtcgggcgcgacggc
ggcttcgtcgagccgaggggcggcctgcgaccaaagcgcgagctgctcgagctcgacgtg
gtggtgaactgctgtcacggcggtccgggcgaggacggggcgctccagggggcgctcgat
cttgcgggcgtgcgctacaccggccccagtgctcggaccgccgcactcgggatggacaaa
ctcgcgttcgcgagcctgttgcgccaccacggcatcgcgtgcttgccgcgcgaggacggg
cgccgcgtgaccttcgacggaccctacatcgccaagccgcgcttcggcggctcgtcgatc
ggtatcgaggtcctcgaggatcgggcccagctcgaggcacgcatgcagcgctcggagcat
ttccgcgacggcatggtcgtcgagccctatcgccccgacctcatggatgtacaggtagcc
ctccggcgtttcccgaccccgaccctgtcggcgatcgagcgtccactgcgcagcgccccg
ggcgagcccatcctcacctatcgagagaagtaccagcccatcgggggcatggcgacggcc
ccacgggagttgccggctgcgatcgctcccgagctcgccgagaccattcgctcccttgcc
ctcagcgtgggcgaactcctcgattcgcggggagtcatgcgggtggattttctcgccagc
accgagggcgagtgctacgtcaacgaggtcaacaccatcccagggagcctgtcgcactac
ctgttcgtcgagccgaagatcccctttgcggcccagctcgaggccgacatccgcgaggca
ctcgagcgagcgacctatcggccgaacgtggccggggccgacggctcggtcctgcgctcg
gcggggtccatcgcggccaagctcgcctga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

Download RDF

DBGET integrated database retrieval system