KEGG   Acidimicrobium ferrooxidans: Afer_1249
Entry
Afer_1249         CDS       T00956                                 
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
afo  Acidimicrobium ferrooxidans
Pathway
afo00300  Lysine biosynthesis
afo00550  Peptidoglycan biosynthesis
afo01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:afo00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Afer_1249
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Afer_1249
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:afo01011]
    Afer_1249
Enzymes [BR:afo01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     Afer_1249
Peptidoglycan biosynthesis and degradation proteins [BR:afo01011]
 Precursor biosynthesis
  Amino acid ligase
   Afer_1249
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase
Other DBs
NCBI-ProteinID: ACU54180
UniProt: C7LZM2
Position
complement(1304549..1306048)
AA seq 499 aa
MNAAPVLQGYHGPGPCGRGVCEVGPEVGVTLDALGALVEHARIVGDRATSVTGIAIDHRE
IRAGDLFAAVPGRHVDGRDFAAEAVRRGAVAVLTAGQPVAVGVPQLVVPRASLRTAVGRV
AHRIFGDPSSAVSVIGVTGTNGKTTTVSVVSQLLERLGEGVGVLGTLWSRLTTPEAPELA
RRLAEFRDSGRRWVAMEVSSIAIAMERIEGLHVRVGVFTNLSQDHLDFHGSMEDYFAAKA
RLFEPERTAIGVINVDDPWGARLAASVRVPVVPVSISAVTDIEIDAAGIRFRRNGRWYRS
RLVGEHNLRNILLAVSVLEQVGFDPDLLRGVLGEVESPRGRMQRILGPRGLVVVDYAHSP
DALAAVLRAARLLVGPRGRLLVVFGAGGERDQAKRPLMGAVAEQLADVAIVTSDNPRSED
PAAIAAQIVAGWRDRRGVRVVLDRRAAIEEAVAMMAPGDVLVVAGKGHERVQVIDGVATP
FDDIDVVHAALQDDGGLLA
NT seq 1500 nt   +upstreamnt  +downstreamnt
gtgaacgctgcccccgtgctgcagggctaccatggtccgggtccgtgcgggaggggagtc
tgcgaggtgggtccagaggttggcgtcacgctcgacgccctcggggccctcgtagagcac
gcgcgcatcgtcggtgaccgggcgacctcggtgaccggtatcgcgatcgaccaccgcgag
atccgcgcaggtgacctgttcgccgcggttccggggcgtcacgtggacgggcgtgacttc
gccgcggaggcggtgcgacgcggggctgtcgcggtgctcaccgccggccagccggtcgcg
gtcggtgtgccccaactcgtggtgccacgcgcctcgctccgtacggcggtcggccgcgtt
gcccatcgcatcttcggcgacccgtcgtcggcggtctcggtgatcggtgtgaccggcacc
aacggcaagaccacgacggtgtcggtcgtgtcccagctgctcgagcgcctcggggaaggg
gtcggtgtgctcggcacgctctggagtcgcctcacgacgcccgaggctcccgagctcgcc
cgccgcctcgctgagtttcgcgactcggggcggcgctgggtggcgatggaggtgtcctcg
atcgcgatcgcgatggagcgcatcgaggggctgcacgtacgggtcggggtgttcaccaac
ctgtcgcaagatcacctcgatttccacgggtcgatggaggactacttcgccgcgaaggca
cggctgttcgagcccgaacggacggcgatcggcgtgatcaacgtcgacgatccctggggc
gcgaggctcgcggcgtcggtgcgggtgccggtggtaccggtgagcatcagcgccgtgacg
gacatcgagatcgatgcggcagggatccggttccgtcgcaacggacgctggtatcgctcg
cgtctcgtcggtgagcacaatctccgcaatatcctgctggcggtttccgtgctcgagcag
gtgggcttcgaccccgacctcctccgaggggtgctcggcgaggtcgagagcccacggggc
cgcatgcagcgcatcctcggcccgcgaggcctggtcgtcgtcgactatgcgcactctccg
gacgcgctggcggcggtgttgcgggcggctcgactcctggtcggtccgcgggggcgcctg
ctcgtcgtcttcggtgcgggcggggagcgtgatcaggccaagcggcccctcatgggagcg
gttgccgagcagctggctgacgttgccatcgtcaccagcgacaatcctcgcagcgaggat
cctgctgccatcgcggcccagatcgtcgcggggtggcgcgatcgtcgtggcgtgcgggtc
gtcctcgatcgccgagcggccatcgaggaggccgtggcgatgatggcccccggcgacgtg
ctcgtggtcgcgggcaagggccacgaacgagttcaggtcatcgacggcgttgcgacgccg
ttcgacgacatcgacgtggtgcacgctgcgctccaagacgacggggggctgctcgcgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (35)   

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