KEGG   Acidimicrobium ferrooxidans: Afer_1508Help
Entry
Afer_1508         CDS       T00956                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
afo  Acidimicrobium ferrooxidans
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:afo00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Afer_1508
Enzymes [BR:afo01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Afer_1508
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Afer_1508
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(1575655..1576482)
Genome map
AA seq 275 aa AA seqDB search
MPEAPEVERVREVLAARVEGATLEGIRMVGRRLVRRHDPELLATVSGRPIVSMRRIGKFL
VFDLGTDALVVHLGMAGRLVVSDASATATHVQLVLDFRRAVITLVDPRTFSEAFVDVLGT
DGRPRRLAGLGPDVFGPEEEIAASLERHAARSRRAIKTALLDQRVVAGLGNMYADETLFR
VGVHPSTPMNVLGRRLVAIAEAAGDVAREALAAGGTTFADRAYRDPLDRPGAFGARLAVY
QRAGSPCPRCATSIVRRVLQGRSAHWCPRCQQGGG
NT seq 828 nt NT seq  +upstreamnt  +downstreamnt
gtgccggaggcgcctgaggtcgagcgggtgcgcgaggtgctggccgcacgtgtcgagggg
gcgacgctcgaggggatccgcatggttggacggcgcctcgtgcgccggcacgacccggag
ctcttggcgacggtgtcggggcgcccgatcgtgtcgatgcgacgcatcggcaagttcctg
gtgttcgatctcggcaccgacgcgctggtcgtgcacctcggcatggctggacgtctcgtc
gtctcggacgcctcggcgacggcgacccacgtccagctcgttctcgacttccgtcgcgcc
gtcatcacactggtcgatccgcgcacgttctccgaggccttcgttgacgtcctcggcacc
gacgggcggccgcgtcggctcgcggggctcggtcccgacgtgttcggtcccgaggaggag
atcgcagcgagcctcgaacggcacgctgcgaggtctcggcgtgcgatcaagacggcgctc
ctggatcagcgcgtggtggcgggtcttggcaacatgtacgctgacgagaccctctttcgt
gtcggtgtccatccgagcaccccgatgaacgtgctggggcgacgcctcgtggcgatcgcc
gaggctgcgggcgatgtcgcccgggaggcgctcgcagcgggcggtacgaccttcgcggat
cgggcctatcgcgacccgctcgatcggcctggcgcctttggcgcgcgcctcgccgtctac
caacgtgcgggcagtccgtgccccaggtgcgctacgtcgatcgtccggagggtcttgcag
ggccgatcagcgcactggtgcccgcggtgccagcagggagggggctga

DBGET integrated database retrieval system