KEGG T00956: Afer

Acidimicrobium ferrooxidans DSM 10331: Afer_1816

Entry

Afer_1816 CDS T00956

Definition

UDP-N-acetylmuramyl-tripeptide synthetase

Orthology

K01928

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]

Organism

afo Acidimicrobium ferrooxidans DSM 10331

Pathway

afo00300	Lysine biosynthesis
afo00550	Peptidoglycan biosynthesis

Class

Metabolism; Amino acid metabolism; Lysine biosynthesis [PATH:afo00300]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:afo00550]

SSDB

Motif

Pfam:

Mur_ligase_M Mur_ligase_C Mur_ligase

Other DBs

NCBI-GI:

256372579

NCBI-GeneID:

8323910

UniProt:

C7M182

Position

complement(1901140..1902603)

AA seq 487 aa
MLTLRDLHGLVPSARLVGDPSVAIADITLDSRSVSPGAMFCATRGSRFDGHDFVSDAIAR
GAVALLVQHEVALDIPQLVVPSVRHAIGGLVAGFFGRPSERLDLVGITGTNGKTTTSYFI
DSILSLAGRRTGLIGTIEARFGDSNRPSMFTTPEAPELHRLLRQMVDDGVDSVVMEVSSH
GIDQHRIDGTSFRIGVFTNLSPEHLDYHGTIEQYYAAKAQLFLPERTKQAVIGTDTEWGV
RLATQVRIPAVTYGPAPFSDYRVEDVRYDEYGTIFTVVVGGRRRWRLRVPIYGIHNAYNA
AAAVAVAEALGIEGDTIERGLAECHQVAGRFQRIDAGQPFTVVVDYAHTPDSLRALIATA
RALSPKGRVILVAGARGRRDRLKRPELGRAAATADVAILTADNPGDEDPGEIVAQLLAGT
LDVDHKQIIVELDRRGAIGHAIEIAEESDVVLIVGRGHEQTFRVGQTVYRLDDREAAREA
ILAKLAR

NT seq 1464 nt +upstreamnt +downstreamnt
gtgctgacgctgcgtgatctgcatggactcgtgccaagcgctcgtctggtgggcgacccc
tcggtggcgatcgccgacatcacgctggattcacggtcggtctcgcctggagcgatgttc
tgtgcgacgcggggatcgcgtttcgatggtcatgacttcgtcagcgatgcgatcgcgcgt
ggcgccgtcgcgctgctcgtgcagcacgaggtggcactcgacatcccgcaactcgtggtt
ccgtcggtgcggcacgcgatcggcgggctcgtcgcggggttcttcggccgtccatcggag
cggctcgatctcgtcggcatcaccggcaccaatggcaagacgacgacctcgtacttcatc
gactccatcttgagccttgccggccgccgaactggactcatcggcaccatcgaggcgcgc
ttcggggactccaaccgtccgtcgatgttcaccacgcccgaggcgcccgagctgcatcgc
ttgctccggcagatggtcgacgacggagtcgactccgtcgtgatggaggtgtcgtcgcac
ggaatcgaccagcaccgtatcgacggcacgagctttcgaatcggggtcttcaccaacctc
tcgcccgagcaccttgactatcacggcaccatcgagcagtactacgcggccaaggcccag
ctcttcctacccgagcgaaccaagcaggcggtgatcggcaccgacaccgagtggggcgtg
cggctcgcgacccaggttcgcatccctgcggtgacctacgggccagccccgttttcggac
tatcgcgtcgaggacgtgcgctacgacgagtacgggacgatcttcaccgtggtcgtcggc
ggccggcgtcgctggcgtctgcgtgtgcccatctacggcattcacaacgcctacaacgcg
gcagcggcggtggcggtcgcagaagcgctcgggatcgagggcgacacgatcgagcggggg
ctggccgagtgtcatcaggtcgcggggcgcttccagcggatcgacgcgggacaaccgttc
acggtcgtggtcgactacgcgcacacgccggattcgctgcgagcgctcattgcgaccgca
cgagcgctctccccgaagggacgagtgattctggttgcgggggctcggggccgacgtgac
cgcctgaagcgtcccgagctgggacgggccgcagcgaccgccgacgtcgccatcttgacg
gccgacaatcctggcgacgaagacccaggtgagatcgtggcgcagctgctcgcaggcacg
ctcgacgtggaccacaagcagatcatcgtggaactcgatcggcgtggagcgatcggccac
gcgatcgagatcgccgaggagtccgacgtcgtgctcatcgtggggcgcggccacgagcag
accttccgggtgggccagacggtctaccggttggacgatcgcgaggccgcacgtgaggcg
atcctcgcgaagctggctcggtag

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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