KEGG A.ferrooxidans_ATCC23270: AFE

Acidithiobacillus ferrooxidans ATCC 23270: AFE_0295

Entry

AFE_0295 CDS A.ferrooxidans_ATCC23270

Gene name glyA

Definition serine hydroxymethyltransferase (EC:2.1.2.1)

Orthology K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]

Pathway afr00260 Glycine, serine and threonine metabolism
afr00460 Cyanoamino acid metabolism
afr00670 One carbon pool by folate
afr00680 Methane metabolism
afr01100 Metabolic pathways

Class Metabolism; Energy Metabolism; Methane metabolism [PATH:afr00680]
Metabolism; Amino Acid Metabolism; Glycine, serine and threonine
metabolism [PATH:afr00260]
Metabolism; Metabolism of Other Amino Acids; Cyanoamino acid
metabolism [PATH:afr00460]
Metabolism; Metabolism of Cofactors and Vitamins; One carbon pool by
folate [PATH:afr00670]

SSDB

Motif Pfam: SHMT Aminotran_1_2 Beta_elim_lyase Aminotran_5 Cys_Met_Meta_PP
DegT_DnrJ_EryC1 OKR_DC_1
PROSITE: SHMT

Other DBs NCBI-GI: 218666113
NCBI-GeneID: 7136603
UniProt: B7J439

Position 265259..266503

AA seq 414 aa
MFSKTLTIADFDPVLWDAMRKEARRQEDHVELIASENYASPMVMAAQGSVLTNKYAEGYP
GKRYYGGCEYVDIAEQLAMDRALELFGAEHANVQAHSGSQANQAVYLSVLQPGDKIMGMS
LAHGGHLTHGAKVNVSGKLFQVAAYGVRAEDGRIDYDAMAEQAERERPKMIVAGASAYSR
VIDFARIGEIARSIGAYLLVDMAHIAGLVATGLHPSPVPHADFVTTTTHKTLRGPRGGLI
LCREQYAKKVNSLIFPGLQGGPLMHVIAAKAVAFREALQPEFKSYQQQVIHNAQTLSKVL
AGRGYGAVSGGTDNHLFLLNLGEKVTGKEAEEALGQANITVNKNAVPFDIRPPAVTSGIR
IGTPAATTRGFGEAEMHRLGNGIADVLDASSDAAVIERVRADMKALCHQFPVYG

NT seq 1245 nt +upstreamnt +downstreamnt
atgttttccaaaaccctgaccatcgctgattttgaccccgtgctttgggatgccatgcgc
aaagaggcccggcgccaggaggatcatgtcgagctcatcgcttccgagaactatgccagc
cccatggtaatggcggcgcagggctcggtgctgaccaacaaatacgcagaaggctatcct
ggtaaacgctactatggcggctgcgagtacgtagatatcgccgagcagctcgccatggac
cgtgcgctggagcttttcggcgctgaacatgccaatgtccaggctcattccggctcgcag
gccaatcaggctgtttacttgtccgtgctccagcccggtgacaagatcatgggcatgagt
cttgcccatggcggccacctgacccatggcgccaaagtgaacgtgtccggcaagcttttt
caggtggcggcttacggcgtgcgcgcggaagacggccgcatcgattatgacgccatggcg
gagcaggcggagcgggaacgcccgaagatgatcgttgccggtgccagtgcctactctcgc
gtcatcgacttcgcccgcatcggcgagattgcccgcagcatcggcgcctatctgctggtg
gacatggcgcacatcgccggccttgtggccacgggcctgcatcccagccccgtgccccat
gcggattttgtcaccaccaccacccacaagaccctgcgcggtcctcgcggcggattgatc
ctctgtcgggagcaatatgccaaaaaggtgaactccctgatcttccccggcttacagggg
gggccgctgatgcatgtcatcgctgccaaggccgtcgccttccgtgaagcgctgcagccg
gagttcaagtcctatcagcagcaggtcattcataacgcgcaaaccttgagcaaggtgttg
gccgggcgtggttatggcgcggtttcgggtggcaccgacaaccatctcttcttgctgaac
ctgggcgaaaaagtcacgggtaaggaggcggaagaggcactgggacaggccaatatcacc
gtcaacaagaatgccgtgcccttcgatatccgccccccggcggttaccagcggcatccgg
attggtacgccggccgctaccacgcgtggctttggcgaggccgaaatgcatcgcctgggc
aacggcattgctgatgtcctggatgcgagcagcgatgctgcggtcattgagcgggtccgt
gcagatatgaaggccctctgccatcagtttccggtatacggctga

All links

Pathway (5)   
   KEGG PATHWAY (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (7)   
   PROSITE (1)   
All databases (23)

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