KEGG   Acidithiobacillus ferrooxidans ATCC 23270: AFE_0680
Entry
AFE_0680          CDS       T00810                                 
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
  KO
K00566  tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
Organism
afr  Acidithiobacillus ferrooxidans ATCC 23270
Pathway
afr04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:afr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    AFE_0680 (trmU)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:afr03016]
    AFE_0680 (trmU)
Enzymes [BR:afr01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.13  tRNA-uridine 2-sulfurtransferase
     AFE_0680 (trmU)
Transfer RNA biogenesis [BR:afr03016]
 Prokaryotic type
  tRNA modification factors
   Thiolation factors
    AFE_0680 (trmU)
SSDB
Motif
Pfam: tRNA_Me_trans tRNA_Me_trans_C tRNA_Me_trans_M NAD_synthase QueC ThiI Asn_synthase ATP_bind_3 Secretin_N
Other DBs
NCBI-ProteinID: ACK79058
UniProt: B7J5X6
Position
607040..608098
AA seq 352 aa
MADKKALIALSGGVDSAVAALLMQGQGYELTGVTMRLWPRSRCCDEKDIEDAAEICARLG
IPYTVLDYREAFRRQVVDVFVAEYQAGRTPNPCARCNQFLKFDALLAEGEKLGATMLATG
HYARLAETSSGTALLRGRDHAKDQSYFLFAIGAGILSRLRFPVGGMNKDEVRAMARKHGL
PVAAKQDSQDICFVPDGDYRRFLEDYAGLDMAQEGEMVDSSGQVLGHHPGTLHFTVGQRK
GLGGGSDQPRYVLALDPAQNRVIVGGEDELYRGVVSLAECNWLTDLSPGETHAVTVKLRY
RSRAESAMLHLLSDARAELRFREPQRAVTPGQAAVCYQGERLLGGGWIQGTE
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggccgataaaaaagccctcatcgccctctcgggaggagtggattccgccgtggcggcc
ctgctcatgcaggggcagggctacgaactcaccggcgtgaccatgcgcctgtggcccagg
agccgctgctgcgatgaaaaagatatcgaagacgccgccgagatctgcgcccgtctgggg
attccctacacggtgctggattatcgcgaggcgttccgacgtcaggtggtcgacgtattt
gtcgccgaatatcaggcggggcgtacgcccaatccttgtgcgcgctgcaatcagttcctc
aagttcgatgctttgctggcggaaggcgaaaagttgggcgccacgatgctggcgacgggc
cattatgcgcggctggcggaaacctcctcgggtactgctctgctgcgtggccgtgaccat
gccaaagatcaatcctattttcttttcgccattggcgcggggatactgtcccgcctgcgc
tttcccgtgggtggcatgaacaaggacgaggtgcgcgccatggcccgtaagcatggcctg
cccgtggccgccaagcaggactcacaggatatctgctttgtcccggacggcgactaccgc
cgctttctggaggattacgccgggctggacatggcgcaggaaggagagatggttgacagc
agcgggcaggtgctgggccatcatccgggtacgctccacttcaccgtagggcagcgcaaa
ggtctgggtggcggcagtgaccagccgcgctatgtccttgcgctggacccggcgcagaac
cgggtgattgtcggaggtgaggatgagctctaccgcggtgtggtcagcctggccgagtgc
aactggctgacggatttgtcccccggcgaaacccacgccgtgaccgtaaaactgcgttac
cgctcccgcgccgagtcggccatgctgcatctgctctccgatgcccgggccgaactccgc
tttcgcgagccgcaacgcgccgttacccccggtcaggccgccgtctgctatcagggtgag
cgcctgctgggcggagggtggattcagggcacggaatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (9)   
   Pfam (9)   
All databases (28)   

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