KEGG   Acidithiobacillus ferrooxidans ATCC 23270: AFE_1967
Entry
AFE_1967          CDS       T00810                                 
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
  KO
K03274  ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
Organism
afr  Acidithiobacillus ferrooxidans ATCC 23270
Pathway
afr00540  Lipopolysaccharide biosynthesis
afr01100  Metabolic pathways
afr01250  Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:afr00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    AFE_1967 (rfaD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:afr01005]
    AFE_1967 (rfaD)
Enzymes [BR:afr01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.20  ADP-glyceromanno-heptose 6-epimerase
     AFE_1967 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:afr01005]
 Core region
  AFE_1967 (rfaD)
SSDB
Motif
Pfam: Epimerase GDP_Man_Dehyd 3Beta_HSD RmlD_sub_bind KR NAD_binding_4 Polysacc_synt_2 NAD_binding_10 Pyr_redox
Other DBs
NCBI-ProteinID: ACK77892
UniProt: B7JC62
Position
complement(1719747..1720736)
AA seq 329 aa
MYIVTGGAGFIGANLVQALNQRGITDILVVDHLSRADKFLNLTDLEIADYMEAEAFLRLI
ENKHLKGVEAVFHEGACSDTMATDGRYVMENNFTFSKVLLHWCQHHDVPFLYASSASVYG
MTGIFVEERYAESPLNVYGFSKFQFDQYLRQIWTDLRAPVHGFRYFNVYGPREFHKNRMA
SVALHFYNQYRLDNHVRLFAGSGSYADGEQRRDFIYIDDVVSVNMHFLDHPHSGIYNVGT
GQAQSFNEMAVAVINSLEHRANRPTLTLPALQKTQAIRYVNMPEALNGKYQSFTQAEISK
LRGAGYDRTFLTVGQGVDRYVQWLTERTT
NT seq 990 nt   +upstreamnt  +downstreamnt
atgtatatcgtcactggcggggccggttttatcggcgccaatctcgtgcaggccctcaat
caacggggcattacggatattctcgtcgtcgaccatctgagccgcgccgacaagtttctc
aatctcaccgatctggaaattgccgactacatggaggcagaggcttttcttcgactgata
gagaacaaacatctgaagggtgtcgaagccgttttccatgaaggcgcatgctccgatacg
atggcgacagatggccgttatgtcatggaaaacaacttcaccttcagcaaagtgctgctg
cattggtgccaacatcatgatgtccccttcctttatgcctccagcgcctcggtctacggc
atgactggtatctttgtcgaggagcgctacgccgaatcgcccctcaacgtctacggattc
agcaagtttcagttcgaccagtatctccggcagatctggacggatttgcgggcgccggta
catggctttcgttattttaacgtctacggtccacgcgagtttcacaaaaaccgcatggcc
tcagtagcgctgcatttttacaaccaatatcggctggacaatcatgttcgcctgtttgcc
gggtctggcagctatgccgatggtgaacaacggcgcgatttcatttatatagacgatgtg
gtttccgtcaacatgcatttcctggatcacccgcacagcggaatttacaatgtaggcaca
ggacaggcgcagagtttcaacgagatggcagtcgccgtcatcaatagcttggagcaccgc
gctaaccgcccgacactgaccctgcccgcactgcagaaaacgcaggccattcgttacgtc
aatatgcccgaagccctgaatggtaagtaccagagcttcacccaggcggaaatcagtaaa
ctgcgcggtgcaggatatgacagaacctttctgaccgtgggacagggggtggatcgctat
gtgcaatggctcacggaacggacgacctga

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