| Entry |
|
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| Gene name |
rpoN
|
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| Definition |
RNA polymerase sigma-54 factor
|
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| Orthology |
| RNA polymerase sigma-54 factor |
|
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| Organism |
afr Acidithiobacillus ferrooxidans ATCC 23270
|
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| Pathway |
|
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| Class |
Environmental Information Processing; Signal transduction; Two-component system [PATH: afr02020]
 |
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| SSDB |
    |
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| Motif |
 |
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| Other DBs |
NCBI-GI: NCBI-GeneID: UniProt: |
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| Position |
complement(2717235..2718662)
 |
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| AA seq |
475 aa  
MKQGLELKLGQHLAMTPQLQQAIRLLQLSTVDLQQEVQGMLESNPLLDEETGDEGGGGPI
PETVELPSEERQLDLAAENILPDELPVDSQWDDIFDMGTSGSGNGSDEDLPDFESRNSRT
QSLQDYLRWQADMTHFTADERNMAELIIDAIDERGYLADSLEDLAATMNVQEDALLAVLL
RVQDFDPPGVGARNLSECLLLQLKQMVEKDDAHVLLAQRIVKDHLQALGRHDYPRLCTVL
GVDEAALRAAMALISALNPKPGEDVGTESTEYVIPDVIVRWAGSRLRTDLNPEAMPKLRI
NRHYADMAGGKDAAHKYIQDQLNEARWFIKSLQSRQDTILKVARAIVERQKDFFANGPES
MRPMVLRHIADAVEMHESTVSRVTNQKYMITPRGLYEFKYFFSSHVGTDSGGSASATAIR
ALLIKMTQAEDAQHPLSDAEIARVLADQGIQIARRTVAKYREAANVPPASQRRRL |
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| NT seq |
1428 nt  +upstreamnt +downstreamnt
atgaaacaaggcttagaactcaagctcggccagcatctggccatgacgccgcaactgcaa
caggcgattcgtctgctgcagttgtctacggtcgatctgcagcaagaggttcaaggtatg
ctggagagcaacccgctgcttgatgaagaaaccggagacgaaggcggtggcgggccgatc
ccggagaccgtggaacttccttccgaagagcgccagttggatctggcggctgagaatatc
ctgcccgacgagttgccggtagacagccagtgggacgacatcttcgacatgggaacctcg
ggctccggtaatggttccgacgaggatctgccggattttgaatcgcgcaacagccgcacc
cagagcctgcaggactacctccgctggcaggccgacatgacgcacttcactgctgacgaa
cgcaacatggcggagttgatcatcgacgccattgatgagcgtggttatctcgcagacagc
ctggaagacctcgccgccacaatgaatgtgcaggaggatgcgctgctggccgtgctgctc
cgtgtgcaggacttcgacccgccgggtgttggcgcgcgcaatctcagcgagtgcctcctg
ctgcagctgaagcagatggtggaaaaagatgacgcgcacgtgttgctggcccagcggatt
gtgaaggaccatctgcaagccttgggccgtcatgattacccgcgtctgtgcacggtgctg
ggcgtggatgaagcggcattgcgtgcggcgatggcgctgatttccgcactgaatcccaag
cccggtgaagatgtgggcaccgagagcaccgagtatgtgatccccgatgtgatcgtgcgc
tgggccggcagccgcctgcgcaccgatctgaatcccgaggccatgcccaaattacgcatc
aatcgtcactatgccgacatggcgggcgggaaagacgcggcgcataaatacatccaggat
cagcttaatgaagcgcgctggtttatcaaaagcctgcaaagccgccaagacaccatattg
aaggtggcgcgcgccattgtcgaacggcagaaggatttttttgccaacgggcccgaatcc
atgcggcccatggttctgcgtcacatcgccgatgcagtggaaatgcatgagtctacggtg
tcgcgggtcaccaaccagaaatacatgatcacaccccgcggcctctacgagttcaaatat
tttttttccagtcatgtcggtaccgacagcgggggctctgcgtcggccactgccattcgc
gcgttgctcatcaagatgacgcaggcggaagacgcacaacaccccctcagcgacgcggaa
attgcccgggtgctggccgatcagggcattcagatcgcgcggcgaacggtggccaagtac
cgcgaagcggccaatgtcccaccggcgagccagcgccgtcgtttgtga |
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