KEGG   Actinoplanes friuliensis: AFR_42420Help
Entry
AFR_42420         CDS       T02892                                 

Definition
(GenBank) DNA-formamidopyrimidine glycosylase
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
afs  Actinoplanes friuliensis
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:afs00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    AFR_42420
Enzymes [BR:afs01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     AFR_42420
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     AFR_42420
DNA repair and recombination proteins [BR:afs03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     AFR_42420
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
Position
9243382..9244242
Genome map
AA seq 286 aa AA seqDB search
MPELPEVEALAAYLRERAVGHAVERFEVSSFSALKTYDPPPSAVAGLVITSAGRHGKFLD
LTFGDDLHLVVHLARAGWLHYRDAFKSPLPLKPGSGPIAIRVRLDDGSGFDLTEAGTQKS
LAAYLVRDPAEVPGVSRLGPDALAVSRDEFAERLRSRRGQVKGVLTDQEVLAGIGNAYSD
EILHVAKMSPFALTSKLTDEQITTLFDAMRQVETDAVTRSVGQKAAELKGEKRAGMRVHA
RTGLPCPVCGDNVREVSFADKSLQYCATCQTGGKPLADRRLSKLIR
NT seq 861 nt NT seq  +upstreamnt  +downstreamnt
gtgcccgagcttcccgaggtcgaggcgctcgccgcttacctgcgggagcgtgcggtcggc
cacgccgtcgagcgcttcgaggtgtcctcgttcagcgcgctgaaaacgtacgatccgccg
ccgagcgcggtcgccggactggtgatcaccagcgccggccgccacgggaagttcctcgac
ctgaccttcggcgacgacctgcacctcgtggtgcacctggcccgggcgggttggctgcac
tatcgggacgcgttcaagtcgcccctgccgctcaagccgggcagcgggcccatcgcgatc
cgggtgcgcctcgatgacgggtccgggttcgacctgaccgaggccgggacgcagaagtcg
ctggcggcgtacctggtgagggacccggcggaggtccccggcgtctcccggctggggccg
gacgcgctggcggtgagccgggacgagttcgccgagcgcctccgcagccgccgcggccag
gtcaagggtgtgctgaccgaccaggaggtgctcgccggcatcggcaacgcctactccgac
gagatcctgcacgtggcgaagatgtcgccgttcgcgctgacgagcaagctcaccgacgag
cagatcaccactctgttcgacgcgatgcggcaggtggagaccgacgccgtcacccgctcg
gtgggccagaaggccgccgagctcaaaggcgaaaaaagggccggcatgcgcgtccacgcc
cggacgggtctgccctgcccggtctgcggcgacaacgtccgtgaggtgtccttcgccgac
aagagcctgcagtactgcgcgacctgccagaccggcggcaagcccctcgccgatcgacgc
ctctcgaagctgatccgctga

DBGET integrated database retrieval system