KEGG T00011: AF1725

Archaeoglobus fulgidus: AF1725

Entry

AF1725 CDS T00011

Definition

DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

afu Archaeoglobus fulgidus

Pathway

afu03410	Base excision repair
afu03420	Nucleotide excision repair
afu03430	Mismatch repair
afu03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:afu03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:afu03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:afu03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:afu03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_OB_2 mRNA_cap_enzyme

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

UniProt:

Position

complement(1548270..1549211)

AA seq 313 aa
MSWFDKKIKPMLAVRSKPFSSDDHIYEVKWDGTRCLAFVDVEGKRVRLQNRRLLDITYRY
PEIKLLDAVERNAILDGEVVVIKDGKPSFPLLQKREHVDSRFKIEILSKTIPAVYIVFDV
LYCDGWVVDLELMERKKILSEVLQSRGRVVVEEWIEGKGEEFYRKAVEMGLEGIVAKKKD
GRYLIGKRSRLWKKIKKRNTLDCVIVGWIEGEGERAKTFGSLVLAVYEDGRLKHVGNVGT
GFDSEFLNWFSERLREIEVAKPHFEIETKNVHWVKPRYVCEVEFLEFTEDGKLRAPVFLR
LREDKSPDECRID

NT seq 942 nt +upstreamnt +downstreamnt
atgagctggttcgataaaaaaatcaagccgatgcttgctgtcaggtcaaagcccttcagc
agcgacgaccacatttacgaggttaagtgggatggaacgaggtgcctcgctttcgttgat
gtggagggaaagagggtcaggctgcagaacagaaggctactggacataacctaccgctac
cccgagattaaactgctggatgctgtcgagagaaacgcgattctcgacggtgaggttgtt
gtgataaaggacggtaagccctccttccctcttctgcagaaaagagagcatgtggacagc
agattcaagattgagattctcagcaaaaccattcccgcagtttacatagttttcgacgtt
ctttactgcgacggctgggttgtggatttggagctgatggagaggaagaagatactctcc
gaagttctccaaagcaggggaagggttgtggtggaggagtggattgaaggtaaaggggag
gagttctacagaaaagcggtggaaatggggcttgaagggattgtagcaaagaaaaaggat
ggaagatacttgataggcaaaaggagcagactctggaagaagataaagaagaggaacaca
ctggactgcgttatagtgggatggattgagggagagggagagagggcaaagacctttggc
tccctcgttctggctgtttacgaggatggaaggcttaaacatgtcggcaacgttggtacc
ggctttgattctgagtttctgaactggttctcggagaggttgagggaaatagaggttgca
aagccgcacttcgaaatcgagaccaaaaacgttcactgggttaagccgagatacgtctgc
gaggtggagttcctcgagttcaccgaagacgggaagctcagagcaccggtgtttctgaga
ctgagagaggacaaaagtcccgatgaatgcaggattgattaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

Download RDF

DBGET integrated database retrieval system