KEGG T00559: Anae109

Anaeromyxobacter sp. Fw109-5: Anae109_1007

Entry

Anae109_1007 CDS T00559

Definition

DNA polymerase LigD polymerase subunit

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

afw Anaeromyxobacter sp. Fw109-5

Pathway

afw03410	Base excision repair
afw03420	Nucleotide excision repair
afw03430	Mismatch repair
afw03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:afw03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:afw03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:afw03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:afw03450]

SSDB

Motif

Pfam:

DNA_primase_S AlaDh_PNT_C

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(1140405..1141322)

AA seq 305 aa
MEVAGRRLVLKNLDKVFYPQAGFTKGDVIDYYARVAPVLLPHLRDRPLTMKRYPEGVEGM
FFYEKRCPRHRPAWVHTEKVWSAGNDEFIDYCVANDLPTLVWAASIADLELHTSLSLARA
VDTPTLLVFDLDPGPPADVVTCCDVALLLRRLLARLELEAFPKTSGSKGLQLYVPLNGPA
SYDDTKPLAHAVAQVMERTNPELVVERMTKQLRAGKVLVDWSQNDPHKTTVCVYSLRARP
RPTVSTPVTWAEVEKAARTRRGEGLVFEAADVLARVERRGDLFEPVLIRRQRLPGPGTIE
RAVAR

NT seq 918 nt +upstreamnt +downstreamnt
gtggaggtcgcaggccgccgcctcgtcctcaagaacctcgacaaggtcttctacccgcag
gccgggttcacgaagggcgacgtcatcgactactacgcccgcgtcgcgccggtgctgctc
ccgcacctgcgcgaccgcccgctcacgatgaagcgctaccccgaaggcgtcgagggcatg
ttcttctacgagaagcgctgcccgcgccatcggccggcgtgggtccacaccgagaaggtg
tggagcgcgggcaacgacgagttcatcgactactgcgtcgcgaacgacctgcccacgctc
gtgtgggcggccagcatcgcggatctcgagctgcacacctccctctcgctcgctcgcgcg
gtggacaccccgaccctgctcgtcttcgatctcgatcccgggccgcccgcggacgtggtc
acctgctgcgacgtggcgctcctgctccgccgcctgctcgcgaggctcgagctcgaggcc
ttccccaagacctccggctcgaaggggctccagctctacgtgccgctcaacggcccggcg
agctacgacgacacgaagccgctcgcgcacgccgtcgcccaggtgatggagcggacgaac
ccggagctcgtcgtcgagcggatgaccaagcagctgcgggccggcaaggtgctcgtggac
tggagccagaacgacccgcacaagacgaccgtgtgcgtgtactccctgcgggcgcgccct
cgccccacggtgtccacgcccgtgacctgggcggaggtggagaaggcggcccgcacccgg
cggggcgagggcctcgtgttcgaggccgccgacgtcctcgcccgggtcgagcggaggggc
gacctcttcgagccggtcctcatcaggcggcagcgcctgcccggtcctgggaccatcgag
cgcgcggtggcccgctag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-AFW (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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