KEGG   Anaeromyxobacter sp. Fw109-5: Anae109_4038Help
Entry
Anae109_4038      CDS       T00559                                 
Gene name
ligC
Definition
ATP-dependent DNA ligase
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
afw  Anaeromyxobacter sp. Fw109-5
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Class
Genetic Information Processing; Replication and repair; Base excision repair [PATH:afw03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:afw03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:afw03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:afw03450]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
4728522..4729619
Genome map
AA seq 365 aa AA seqDB search
MPYPIAPPVEPMLAKLSEALPEGDGWLFEPKWDGFRALVFRDGPELFLQSRELKPLNRYF
PELEQPLLASLPERCVLDGEIVIAGESGLDFEALLLRIHPAASRVRLLAQESPASIVLFD
LLALGDRDLRSSPLAERRAQLEGRLARAATQVHVTPATTDRAVAQDWFSRFEGAGLDGVV
AKRLDSTYQPGVRAMVKVKHARTADCAVAGFRWHKNGPGTMVGSLLLGLYDDGGKLHHVG
ICSAFSVARRKELVKELAPLRENAKDHPWRDWAEWADADREPAQRMPGASSRWNRGKDLS
WEPLRVERVCEVAYDHLQGDRFRHATHFLRWRPDRSPSECRYDQLEVTPAYELSRIFGVR
SRASR
NT seq 1098 nt NT seq  +upstreamnt  +downstreamnt
atgccctacccgatcgcgccccccgtggagcccatgctggccaagctctcggaggccttg
ccggagggtgacgggtggctgttcgagccgaagtgggacggcttccgcgcgctggtgttc
cgcgacggcccggagctcttcctccagtcgcgcgagctcaagccgctgaaccgctacttc
cccgagctcgagcagccgctcctcgcgagcctccccgagcgctgcgtgctggacggcgag
atcgtcatcgccggggagtccggcctcgacttcgaggcgctcctcctccgcatccacccc
gcggcgtcgcgggtgaggctgctcgcgcaggagagcccggcgagcatcgtgctgttcgac
ctgctcgccctcggcgaccgcgacctgcgctcctcgccgctcgcggagcggcgcgcgcag
ctcgaggggcgactggcgcgcgcggcgacgcaggtccacgtgacgccggcgacgacggac
cgggccgtggcgcaggactggttctcgcgcttcgagggcgcggggctcgacggcgtcgtc
gcgaagcggctcgactcgacctaccagcccggcgtgcgcgccatggtgaaggtgaagcac
gcgcgcacggccgactgcgccgtggccggcttccgctggcacaagaacggccccggcacg
atggtgggctccctcctgctcgggctctacgacgacggcggcaagctccaccacgtcggc
atctgcagcgccttctcggtcgctcgccgcaaggagctcgtgaaggagctggcgccgctg
cgcgagaacgcgaaggaccacccctggcgcgactgggcggagtgggccgacgcggaccgc
gagcccgcgcagcgcatgcccggcgcgagcagccgctggaaccgcggcaaggacctctcc
tgggagccgctgcgggtggagcgcgtctgcgaggtcgcctacgaccacctgcagggcgac
cgcttccgccacgccacccacttcctgcggtggcggccggacagatcgccgagcgagtgc
cgctacgaccagctcgaggtgacgccggcgtacgagctctcgcgcatcttcggggtgcgc
tcgcgggcgtcgcgctaa
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