KEGG   Agrobacterium sp. RAC06: BSY240_2871
Entry
BSY240_2871       CDS       T04501                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
agc  Agrobacterium sp. RAC06
Pathway
agc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:agc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BSY240_2871 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:agc03021]
    BSY240_2871 (rho)
   03019 Messenger RNA biogenesis [BR:agc03019]
    BSY240_2871 (rho)
Transcription machinery [BR:agc03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     BSY240_2871 (rho)
Messenger RNA biogenesis [BR:agc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BSY240_2871 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_22 AAA_25 DUF6360 NACHT AAA
Other DBs
NCBI-ProteinID: AOG12100
UniProt: A0A1B3P3A7
Position
2942460..2943725
AA seq 421 aa
MAEMKLQELKSKSPTDLLTFAESLEVENASTMRKQELMFAILKMLASQDVEIIGEGVVEV
LQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRGPKEGERYFALLKVN
TINFEDPEKIRHKVHFDNLTPLYPNERFKMELDVPTSKDLSARVIDLVAPLGKGQRGLIV
APPRTGKTVILQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVRGEVVSSTFDEPAV
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPA
MDILKSGTRKEDLLVPRQDLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKNNGDFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggctgaaatgaagctacaagaactcaaaagcaaatcgccgaccgatctcctgaccttt
gctgaatcgctcgaagttgaaaacgcgagcacgatgcgcaagcaggagctgatgtttgcg
atcctgaagatgctcgcgagccaggatgttgagatcatcggcgaaggcgtggtggaagta
ctgcaggatggcttcggtttcctgcgttcggccaatgcgaactatctcccaggccctgac
gatatctacatttcgccctcacagatccgccgcttctcgttgaagaccggcgataccgtc
gaaggtccaatccggggaccgaaggaaggcgagcgctatttcgccttgctgaaggttaac
acgatcaatttcgaggatcccgaaaagatccgccacaaggtgcatttcgacaacctgacg
ccgctctatccgaacgagcgcttcaagatggaactcgatgttccgacgtcgaaggacctg
tctgcacgcgtcatcgatctcgtggcgccactcggcaagggccagcgtggcctgatcgtc
gcaccaccgcgcaccggtaagacggtcattctccagaatatcgcgcattcgatcacggcc
aaccatccggaatgttatctgatcgtccttctgatcgacgaacgtccggaagaagtgacc
gacatgcagcgttcggtccgcggtgaagtcgtgtcttcgaccttcgacgagcccgcggtt
cgtcacgttcaggtggcggaaatggtcatcgagaaggccaagcgtcttgtcgaacatggg
cgagacgtcgtcattctgctcgattccatcacgcgcctcggccgcgcctacaacaccgtt
gtgccgtcgtccggcaaagtcttgaccggtggtgtcgatgccaatgcattgcagcgcccg
aagcgcttcttcggtgcagcgcgcaacatcgaagaaggcggttcgctgacgatcatcgca
acggcactgatcgacactggtagccgtatggacgaagtcatcttcgaagagttcaagggc
actggtaactcggaaatcgttctcgatcgcaaggtcgcggacaagcgcatcttcccggcc
atggacatcctcaagtccggtacgcgtaaggaagatctgttggtcccgcgccaggatctc
cagaagattttcgttctccgccgtattcttgcgccgatgggcacgaccgatgccatcgaa
ttcctcatcgacaagctcaagcagacgaagaacaacggcgacttcttcgactcgatgaac
acctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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