KEGG   Agrobacterium sp. RAC06: BSY240_4076
Entry
BSY240_4076       CDS       T04501                                 
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
  KO
K00566  tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
Organism
agc  Agrobacterium sp. RAC06
Pathway
agc04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:agc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    BSY240_4076 (trmU)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:agc03016]
    BSY240_4076 (trmU)
Enzymes [BR:agc01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.13  tRNA-uridine 2-sulfurtransferase
     BSY240_4076 (trmU)
Transfer RNA biogenesis [BR:agc03016]
 Prokaryotic type
  tRNA modification factors
   Thiolation factors
    BSY240_4076 (trmU)
SSDB
Motif
Pfam: tRNA_Me_trans tRNA_Me_trans_M tRNA_Me_trans_C Asn_synthase QueC Arginosuc_synth NAD_synthase ATP_bind_3 Herpes_UL56 ThiI
Other DBs
NCBI-ProteinID: AOG12475
UniProt: A0A1B3P4E5
Position
complement(4250261..4251457)
AA seq 398 aa
MNTLDFDKRPEDTRVVVAMSGGVDSSVVAGILKREGYDVLGITLQLYDHGAAVHRAGSCC
AGQDIDDARRVCETLGIPHYVLDYEQRFRDTVINPFMESYVAGETPIPCVACNQTVKFAD
LLTTARELGADALATGHYIRSKSVPLANDPGHRALFRPIDSERDQSYFLFATTQEQIDYL
RFPLGAMSKAEVRVLAEEMGLVVAQKADSQDICFVPQGKYADVINKLKPNAALAGDIVHL
DGRVLGNHEGILHYTIGQRKGLGVATGEPLYVIYLDARSRRVIVGPKEALETHRVYLRDI
NWLGDRTLAEDAADGMPCFAKVRSTRPPTPAVLHADERGVYVDLEIGEAGVAPGQACVLY
SATGADARVYGGGFIERSERSGTAESALKALLASPVAA
NT seq 1197 nt   +upstreamnt  +downstreamnt
gtgaacacgctggattttgacaagagaccggaagatacgcgcgtcgtcgtcgccatgtcg
ggcggcgtggactcatccgtcgtcgccggcatcctgaagcgcgagggctatgacgtcctc
ggcatcacgctgcagctttacgaccatggcgccgccgtccaccgcgccggctcctgctgc
gccggccaggacatcgacgatgcccgccgcgtctgcgaaacgctcggcattccccattac
gtgctcgattacgaacagcgttttcgcgacaccgtgatcaacccgttcatggaaagctat
gtcgccggcgaaacgccgatcccctgcgtggcctgcaaccagacggtcaagttcgccgac
ctgctgacgaccgcacgggaactcggcgccgacgcgctggcgaccggccattacatccgc
tcgaagtcggtgccgctcgccaatgatcccggccaccgcgccctcttccggccgatcgat
agcgagcgcgaccagagctatttcctctttgccaccacgcaggagcagatcgactatctg
cgcttcccgcttggtgccatgtcgaaggcggaagtccgcgtgctcgccgaagagatgggc
ctcgtcgtcgcccagaaggccgacagccaggacatctgtttcgtgccccagggcaaatat
gccgacgtcatcaacaagctgaagccgaatgcggctctggccggcgacatcgtgcatctc
gatggccgggtgctcggcaatcacgaaggcatcctgcattacacgatcggccagcggaag
ggcttgggcgtcgccaccggcgagccgctctacgtcatctatctcgatgcccgctcgcgc
cgcgtcatcgtcggcccgaaggaagcgctggaaacccaccgcgtctatctgcgcgacatc
aactggctcggcgaccgcacgctcgccgaagatgccgcagacggcatgccctgcttcgcc
aaggtccgctccacccgcccgccgacgccggcggtactgcatgccgacgagcgcggcgtc
tatgtcgatctcgaaatcggcgaagccggtgtggcccccggccaggcctgcgtgctctat
tcggcaaccggtgccgacgcccgcgtctatggcggcggcttcatcgagcggtcggaacgc
tcgggcacagccgaaagcgcgctgaaggcgcttctcgccagccccgtggcggcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system