KEGG   Archangium gephyra: AA314_07493
Entry
AA314_07493       CDS       T03948                                 
Name
(GenBank) ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
age  Archangium gephyra
Pathway
age03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:age00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AA314_07493
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:age03019]
    AA314_07493
Enzymes [BR:age01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     AA314_07493
Messenger RNA biogenesis [BR:age03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AA314_07493
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25 P-loop_SecA AAA_22 HEM4 API5
Other DBs
NCBI-ProteinID: AKJ05867
Position
9379836..9381299
AA seq 487 aa
MTFEDLKLAEPLQRAVKAEGYTIPTPIQQQAIPHVLEGKDVLGCAQTGTGKTAAFTLPIL
QRLSVGRPPPPARGRPIRALVLSPTRELAAQIGESIRAYGRFTGITSAVIFGGVGQNAQE
QSLKQGVDILVATPGRLLDLMQQGFVSYKSLEVFVLDEADRMLDMGFIHDVKRVIAALPK
KRQTLFFSATMPPEIQGLANSILTNPVRVEVAPVATTAETIDQRLYFVEKEQKRGLLVHL
LQTDKAIQRVLVFTRTKHGANRVAKQLEAAGIGAEPIHGNKSQNARERALAAFKSGTCRV
LVATDIAARGIDIDGITHVINFDLPNVPETYVHRIGRTGRAGAAGIALSFCDSEERAYLK
DIERTIRRRVPVMEAQAYRSNLPPPAEGALDAAPARAQQSPRPPQGQFRGERRDGGRRDG
NGGGRGRRGGGGGGGGRGANAGGSRGSESARPPRSDRPATQQAQRPSAPAPAAPAAVSQR
PRAPKWL
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgactttcgaagacctgaagcttgccgagcccctgcagcgcgccgtgaaggccgagggc
tacaccatccccacgcccatccagcagcaggccatcccccacgtgctggagggcaaggac
gtgctcggctgcgcgcagacgggtaccggcaagacggcggcgttcacgctgcccatcctc
cagcggctctccgtgggccgcccgccgccgcccgcccgcggccgccccatccgcgcgctc
gtgctcagccccacccgggagctggccgcacagatcggtgagagcatccgcgcctacggg
cgcttcaccggcatcacctccgccgtcatcttcggcggcgtgggccagaacgcccaggag
cagtcgctcaagcagggcgtggacatcctcgtggccacccccggccgcctgttggacctg
atgcagcagggcttcgtgtcctacaagtcgctcgaggtgttcgtcctcgacgaggcggac
cggatgctggacatgggcttcatccatgacgtgaagcgcgtgatcgccgcgctgcccaag
aagcggcagacgctcttcttctcggccaccatgccgccggagatccaggggctggccaac
agcatcctgaccaatccggtgcgggtggaggtggcgccggtggccaccaccgcggagacg
atcgaccagcgcctgtacttcgtggagaaggagcagaagcgcgggctgctggtgcacctg
ctgcagacggacaaggccatccagcgcgtgctcgtcttcacgcgcaccaagcacggggcg
aaccgcgtggccaagcagctggaggccgcgggcatcggcgccgagcccatccacggcaac
aagagccagaacgcgcgcgagcgggcgctggcggccttcaagtccggcacctgccgggtg
ctggtggccacggacatcgccgcgcggggcatcgacatcgacggcatcacccacgtcatc
aacttcgatctgcccaacgtgcccgagacgtacgtgcaccgcatcggccgcacgggccgc
gcgggcgccgcgggcatcgccctctccttctgcgactccgaggagcgcgcgtacctgaag
gacatcgagcgcaccatccgccggcgcgtgccggtgatggaggcgcaggcgtaccgctcg
aacctgccgccccccgccgagggcgcgctcgatgcggcaccggcccgggcgcagcagagc
ccccgtccgccgcagggacagttccggggcgagcgccgggacggcggacgccgcgacggc
aacggcggtggacgcggccgccggggtggtggcggtggcggtggtggccgcggcgcgaac
gcgggaggctcccgcggctcggagtcggcacgtccgcctcggagcgaccgtccagccacc
cagcaggcccagcgcccctcggcgccggcccctgccgcaccggccgccgtttcccagagg
cctcgcgcgcccaagtggttgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (45)   

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