KEGG   Agrobacterium tumefaciens H13-3: AGROH133_02899
Entry
AGROH133_02899    CDS       T01432                                 
Symbol
nrdE
Name
(GenBank) ribonucleotide-diphosphate reductase subunit alpha
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
agr  Agrobacterium tumefaciens H13-3
Pathway
agr00230  Purine metabolism
agr00240  Pyrimidine metabolism
agr01100  Metabolic pathways
agr01232  Nucleotide metabolism
Module
agr_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
agr_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:agr00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    AGROH133_02899 (nrdE)
   00240 Pyrimidine metabolism
    AGROH133_02899 (nrdE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:agr03400]
    AGROH133_02899 (nrdE)
Enzymes [BR:agr01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     AGROH133_02899 (nrdE)
DNA repair and recombination proteins [BR:agr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    AGROH133_02899 (nrdE)
SSDB
Motif
Pfam: Ribonuc_red_lgC RNR_N Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: ADY63060
Position
circular:71899..74088
AA seq 729 aa
MDTLTSSALRNTDAKQQVTAAQKHLDAGLDYHALNAMLNLYDENGKIQLDKDRLAARQYF
LQHVNQNTVFFHNLREKLDYLVTEGYYEQEVLDQYSFNFVRDLYDEAYARKFRFPTFLGA
FKYYTSYTLKTFDGKRYLERYEDRVCMVALALARGDEQLARDLMDEIISGRFQPATPTFL
NAGKKSRGELVSCFLLRVEDNMESIGRSINSALQLSKRGGGVALSLTNIREAGAPIKQIE
NQSSGVIPVMKLLEDSFSYANQLGARQGAGAVYLHAHHPDIMRFLDTKRENADEKIRIKT
LSLGVVIPDITFELARNNEDMYLFSPYDVERVYGVPFTEISVSEKYQEMVADSRIRKKKI
KAREFFQVIAEIQFESGYPYIMFEDTVNRANPIAGRISMSNLCSEILQVSEASEFNDDLS
YSHMGKDISCNLGSLNIASAMDSADFGKTIETSIRALTAVSDMSHISSVPSVEKGNDASH
AIGLGQMNLHGYLARERIFYGSEEGIDFTNIYFYTVTYHAIRASNRLATERGQSFKGFEN
SKYASGDYFDKYTDREWLPATEKVRDLFEKAGISIPTQEDWKALKQAVMETGLYNQNLQA
VPPTGSISYINHSTSSIHPIVSKIEIRKEGKIGRVYYPASYLSNDNLEYYQDAYEIGPEK
IIDTYAAATQHVDQGLSLTLFFRDTATTRDINRAQIYAWKKGIKTIYYIRLRQMALEGTQ
VQGCVSCTL
NT seq 2190 nt   +upstreamnt  +downstreamnt
ttggacacgctgacctcgagcgcgttgcgcaacacggatgccaaacaacaagtaaccgct
gcgcagaaacacctggacgcgggactggactatcacgcgctgaacgcgatgctgaacctc
tacgatgaaaacgggaagatccagctcgacaaggaccgccttgcggcacggcaatatttc
cttcagcacgtcaaccagaacacggtgtttttccataatctcagggaaaagctcgattat
ctcgtgaccgagggatattacgaacaggaggtgctggaccagtattccttcaatttcgtc
cgtgacctctacgacgaggcctatgccagaaagttccgttttccgacatttctcggcgcc
ttcaaatattatacgtcctatacgctgaagaccttcgacggaaagcgttacctggagcgt
tatgaggaccgcgtctgtatggtggcgctggctctggcgcgtggcgacgagcaacttgcc
cgcgatctgatggatgaaatcatttccggccgcttccagccggcaaccccgacctttctc
aacgccggcaagaaaagccgcggtgagctggtttcgtgttttctgctgcgtgtggaagac
aatatggaaagcatcggccggtccatcaattcagcattgcagctttccaagcgtggcggt
ggcgtagcactgtccctgaccaatattcgcgaagccggcgcgccgatcaaacagatcgaa
aaccagtcctccggcgtgattcctgtcatgaagctgctggaagattcgttctcctacgcc
aaccagcttggcgcgcgccagggcgctggcgcggtctatctgcatgcccaccaccccgac
atcatgcgtttcctcgataccaagcgcgaaaacgccgacgaaaaaatccgcatcaagacc
ctttcgctcggcgtagtgatccctgatatcaccttcgaactcgcgagaaacaacgaggat
atgtacctgttctcgccgtatgatgttgagcgggtctatggcgtgccgttcaccgagatt
tccgtcagcgaaaaatatcaggaaatggtcgccgacagtcgcatccgcaagaagaagatc
aaggcacgcgagttcttccaagtcatcgcagaaatccagttcgaaagcggttatccctat
atcatgttcgaggatacggttaaccgcgccaatccaatcgccggccgtatcagcatgagc
aatctctgctcggaaattctacaggtcagcgaggcgagcgaattcaacgacgatctctct
tacagccatatgggcaaggatatttcctgcaatctcggctcgctcaacattgcttcagca
atggattcggctgatttcggcaagacgatcgaaacctccatccgggcgctgacggccgtt
tctgacatgagccacatctcgtctgtcccttccgtggaaaagggcaatgatgcgagccac
gccatcgggcttggtcagatgaacctgcatggctatctggcgcgcgagcgcatcttctac
ggctccgaagagggcatcgatttcaccaatatctatttctacacggtgacctatcacgcc
atccgcgccagcaatcgcctagccactgaaaggggccagagcttcaagggctttgaaaac
tccaaatatgcctcgggcgactacttcgataaatataccgaccgggaatggctgcccgcg
acggaaaaggtccgcgacctttttgagaaagccggcatttccattccgacacaggaggac
tggaaagcgttgaagcaggccgtcatggagaccggcctctataaccagaaccttcaggcc
gtgccgcccacaggctcgatctcctatatcaaccactcgacctcctcgatccatcccatc
gtctcgaagattgaaattcgcaaggaaggcaagatcggccgtgtttattatccggcttcc
tacctttcgaacgacaatctcgaatattatcaggatgcctacgaaatcggtccggaaaag
atcatagatacctatgcggcggccactcagcatgtcgatcagggcctgtcgctgacactg
ttcttccgcgatacggcaacgacgcgcgatatcaaccgggcgcagatctacgcctggaaa
aaaggcatcaagaccatctactacatccgtttgcgccagatggcgctggaaggcacgcag
gttcagggctgcgtatcctgcacgctctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

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