KEGG   Agrobacterium sp. H13-3: AGROH133_03484Help
Entry
AGROH133_03484    CDS       T01432                                 

Gene name
mutM
Definition
(GenBank) Formamidopyrimidine-DNA glycosylase
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
agr  Agrobacterium sp. H13-3
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:agr00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    AGROH133_03484 (mutM)
Enzymes [BR:agr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     AGROH133_03484 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     AGROH133_03484 (mutM)
DNA repair and recombination proteins [BR:agr03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     AGROH133_03484 (mutM)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
Position
circular:310293..311228
Genome map
AA seq 311 aa AA seqDB search
MVLTINCRISQMPELPEVETVRRGLAPTMEGARIRKLHLGRPDLRFPFPEDFAGLIEGRT
IISLGRRAKYLLIELEDGLTIVAHLGMSGSFRIEAAADEAGNRNAPGAFHYARSKDGKHD
HVVFHLDKGEERICVIYNDPRRFGFMHLVERNKLDLYPAFAELGPEPTGNALSADYLASR
FQGKSQPLKSTLLDQKVIAGLGNIYVCEALWRAHLSPLRAAGTLVTKTGEPKPELINLTE
KIRDVIADAIAAGGSSLRDHIQTDGTLGYFQHSFSVYDQEGQPCRTPGCGGTVERIVQAG
RSTFYCAACQK
NT seq 936 nt NT seq  +upstreamnt  +downstreamnt
atggtcctaacgataaactgccggataagccagatgccagaattgccagaagtcgaaacc
gttagacgcggcctcgcgcccaccatggaaggggcaagaatccgcaagctccatcttggc
cgtcccgatctgcgctttccgttcccggaggacttcgcgggcctgatcgagggcaggacg
atcatatcgctcgggcgcagggcgaagtatctcttgatagagctggaagacgggctgacg
atcgttgcccatcttggaatgtccggctcgttccgtatcgaggcggcggcagatgaggca
gggaataggaacgcgcccggcgcgtttcattatgcccgctcgaaggacggcaagcacgat
catgtcgtctttcatctggataaaggcgaagagcgcatctgcgtcatctataatgacccg
cgccgcttcggcttcatgcatctggtggagcgcaacaagctcgacctctaccccgctttt
gcggagctgggaccggaaccgaccggcaacgcgctgagcgcggattatctcgcgagccgg
ttccagggtaaaagccagccgttaaaaagcacgctgctggaccagaaggttattgcgggc
cttggcaatatctatgtctgtgaggcgctgtggcgtgcccatctctcgcctttgcgggcg
gcgggaacgctggtgaccaaaaccggagaaccgaagccggagctcatcaacctcacggag
aagatccgagacgtgatcgcggacgcaatcgccgccggcggctcttccctgcgcgaccat
atacagacggacggaacgctcggttatttccagcattccttttcagtctacgatcaggaa
ggccagccttgccgtacacccggctgcgggggtacggttgaaaggatagtgcaggccggt
cgttcgaccttttattgcgcggcctgccagaagtag

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