KEGG   Agrobacterium tumefaciens H13-3: AGROH133_09385
Entry
AGROH133_09385    CDS       T01432                                 
Name
(GenBank) OmpA-like porin
  KO
K11892  type VI secretion system protein ImpK
Organism
agr  Agrobacterium tumefaciens H13-3
Pathway
agr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:agr00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AGROH133_09385
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:agr02044]
    AGROH133_09385
Secretion system [BR:agr02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AGROH133_09385
SSDB
Motif
Pfam: DotU OmpA NinB
Other DBs
NCBI-ProteinID: ADY65802
Position
linear:53629..55140
AA seq 503 aa
MSTENPSSWQDLPTVVEITEESRRRNQNARNMAAILEDIVETDEPAGPSRAKATAMPVEQ
LLTGFHFGGEEVPTLVQSAAPLLNLAHLLRFSDAEPDPDQLRRACVEAITRYERDLASAR
ISPERARAAHYVVCATVDDVVLSKPWGVRAGWARSGLVSTFHNDVTGGDRVFDILDHFHQ
SPGTNKDLLLLIYLCLSLAFEGRTRVSPKGALELSRIRDSLYKTLIGQYGAFERELSPHW
KGVDARHTPLRAMAALWTMLSLMALAFALGYLFFTLSLNSASDVTFERLAHLPPNETPSV
LIASPPAPTPPPTRVETPRVVDPPKIVEPRQPSRLEKLMAFLQPEVDRKLVTLADVNGRL
RVRINNSGLFTTGSADVSPQFRDLIQRIGGALAAEKFRAVVIGYTDTVPIKTVEFPSNWH
LSEARAKAVGDILSQFTGPEAILTEGRADSDPIADNKTEEGRQINRRTEIMVLTNPDEKL
SDAGILSPPIQNSPGQQPGETQP
NT seq 1512 nt   +upstreamnt  +downstreamnt
atgagcacggaaaacccctcttcctggcaagacttgccaacggtggtcgagatcaccgag
gaaagtcgccggcgcaaccagaacgcccgcaacatggcggcaatcctggaggacatcgtc
gagaccgacgagccggcaggccccagcagggcaaaggcgactgccatgccggtcgaacag
ctgctgaccggtttccacttcggcggcgaggaggttccgacacttgtgcaatcggcagct
ccccttctcaacctcgcacatctgctgcgcttcagcgatgccgagccggatcccgaccag
cttcgccgcgcctgcgttgaagcaattacacgctatgaacgcgacctcgcctccgcccgc
attagccccgagcgggcaagggctgcgcattatgtcgtctgcgcgacggtcgatgacgtc
gttctcagcaagccttggggtgtgcgggcaggctgggcgcgctccgggctcgtttccacg
ttccacaatgacgtcactggcggcgaccgggttttcgacattctcgaccatttccaccag
tcgcccggcaccaacaaggatctgctgcttctgatctatctgtgcttgtcgctggctttc
gaaggacgaacccgcgtttcaccgaaaggagcgctcgagctttcacgcatccgcgacagc
ctctacaaaacgctgatcggccaatatggcgccttcgaacgggagctttctccgcattgg
aaaggtgtcgatgcccgacatacgccattgcgcgcgatggcggcgctctggaccatgctg
tcgctgatggcgctcgccttcgcgctcggttatctcttcttcacgctgtcgctcaacagc
gcatccgatgtcaccttcgaaagacttgctcatctgccgccgaacgaaacaccgagcgtg
ttgatcgcaagccctcctgcaccaacgccgccgccaactagagtggaaactccccgcgtc
gttgatccacccaaaatcgtggagccgagacaaccctcccggcttgaaaagctgatggcc
ttcctgcagccagaagtcgacaggaagctcgtgacccttgcggatgtgaacgggcggctg
cgggttcgcatcaacaattcgggcctgttcacgacaggcagcgccgatgtcagcccgcag
ttccgcgatctcatccagcgtatcggcggcgcgcttgcggctgagaaatttcgtgcggtg
gtcatcggttataccgacaccgtgccgatcaagacggtggagtttccatcgaactggcac
ctttccgaggcgcgcgccaaggccgttggagacattctttcccaattcaccggtcctgag
gcaatcctgaccgaaggccgggccgacagcgacccgatcgccgacaacaagacggaagaa
ggccgtcagataaaccgcagaacagaaatcatggtcctgaccaatcccgatgaaaaactg
agcgatgccggcattctctcgccgcccatacagaacagtccgggacagcagccgggagag
acccagccatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

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