KEGG   Aeromonas hydrophila YL17: AI20_21285
Entry
AI20_21285        CDS       T03186                                 
Name
(GenBank) AAA family ATPase
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
ahd  Aeromonas hydrophila YL17
Pathway
ahd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ahd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AI20_21285
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ahd03400]
    AI20_21285
Enzymes [BR:ahd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     AI20_21285
DNA repair and recombination proteins [BR:ahd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AI20_21285
SSDB
Motif
Pfam: AAA_30 AAA_19 HHH_4 Viral_helicase1 UvrD_C_2 SH3_13 AAA_11 AAA_22 AAA_16 Helicase_RecD PIF1 PhoH T2SSE UvrD-helicase SLFN-g3_helicase AAA_28 nSTAND3 AAA NTPase_1 HerA_C
Other DBs
NCBI-ProteinID: AHV37591
Position
717939..720101
AA seq 720 aa
MNQSLHSELFRVTSIPYSSSSYVIFSGIPLNDETSQIKDGKYYVTIKARPDTLPAQPSQG
QQWTVHGKPLIERVEIGDVVMQQHTYESPEHVICTLPETGEQLIQFIAKEPDFKGIGLGK
ARALWQLLGEQFHATLRTDTPESRERLKGILSDVSIDALFNGYAKYKNLNHCNWMAECRI
PSPIQQRILKFHGESSVDAIKANPYLLVGFGMGFEDVDALSQTKFEVELKDPTRLSAALE
FTIHAEVEKGHTYTTQARLRPLLTKLLGDGELAAQAFKAGYHQAQYVLNHEAGTYHPTAQ
LLMETVVAKRLLKLAKQQNRYDESTNAAFLAAVNELPYELTAMQNEAVLTALNNAVSCIT
GGAGTGKTTVLRTALRAYGKMGFEVHAVALSGRAAMRLYESIGFRTMTISALLRQEPIEP
SDGFPSHLLVIDEASMIDLPTMYRLTNHLHPTVRIIFTGDPNQLPPIGCGKVLADIVASQ
AIANVTLDIVKRQKGATGIPEYSMQVNQGLIPEHLSMGNVYFHETSKERIAQVCAELYQQ
SPENSRVVGATTAMVAEINNLIQEAVNPDGARMIFEMYGETYRRNDLRQGDVILFTQNNY
EKGIQNGSLGTLTRAVGAGDDYGVVELDTGESVYVTQSLLDCMRLGYCITLHKAQGSQFP
RIIIALQKGRIVDRAWLYTAITRAEHEVHIVGSTAEFAAITKAPSNAHNRNSYLRDLLKK
NT seq 2163 nt   +upstreamnt  +downstreamnt
atgaaccaatctctccattccgaactatttcgtgttaccagtatcccatatagctcatcc
agctacgtgattttctctggaataccacttaatgacgagaccagccagatcaaggatggc
aaatactatgtgaccattaaagcgcggcctgacactcttccggcacaaccgtcacagggc
cagcaatggacagtccatggcaaacctctcattgagagggtcgagattggtgatgttgtg
atgcagcaacatacctatgaatcacctgagcacgtgatatgcaccctgccggagacaggt
gagcagctgatccagttcattgccaaggagcctgatttcaagggaattggcctcggtaaa
gccagggcgttatggcaactactcggtgagcaatttcacgccaccctgcgcaccgacaca
ccagagtccagagagcgcctcaagggtattctgagtgatgtatctattgatgccctgttc
aacggctacgcaaaatacaaaaatctgaaccactgcaattggatggcagagtgtcggatt
ccctcacccattcagcagcggatcttgaaatttcatggcgaaagctccgttgatgcaatc
aaagcgaatccctacctactggtcggcttcgggatggggtttgaagacgtggatgcgctt
tctcaaacgaagtttgaggtagaactaaaagatccgacgaggctgagtgccgccctggag
ttcaccatccacgcggaagtggaaaaaggccacacctacaccacgcaggccaggcttcgc
cccctgctgaccaaattgcttggtgacggcgagttggcagcacaagcattcaaggctggt
taccaccaagcccagtatgtgctgaaccatgaagcaggcacctatcaccctaccgcacaa
ttgctgatggagactgttgttgccaagcggctgttgaaacttgctaaacagcaaaatcgt
tacgatgagtccaccaatgctgcgtttctcgcagcggttaatgagctgccctatgaattg
accgcgatgcaaaatgaagcggtgctcaccgcgctaaacaatgcggtgagttgcatcacg
gggggcgcaggaactggcaaaaccacagtgctcagaacggcactgcgggcctatggcaaa
atgggctttgaggtgcatgctgtcgccctttctggacgcgcagcaatgcgcctatacgag
tcgataggctttaggacgatgaccatttccgccttgttgcggcaagagcccatagaacca
tctgatgggtttcccagccatctgctggtaatcgatgaagcatccatgatcgacctgccc
accatgtatcggctcaccaaccatctgcaccccaccgtgcggatcatattcacgggtgac
ccaaaccagctacctccgataggatgtggcaaggtgctagccgatatcgttgcatcacag
gccattgcgaacgtgaccctggacatcgttaaacgccagaagggagccacaggcattcct
gaatactctatgcaggtcaatcaaggtctcataccggagcacttgagcatgggtaacgtc
tatttccacgaaacatccaaagagaggatcgcccaagtctgtgccgagttatatcagcaa
tcccccgagaacagccgagtggtaggtgcgaccaccgctatggtggcggagatcaataat
cttattcaggaggccgtcaaccctgatggtgctcggatgatatttgagatgtatggcgaa
acctaccgccgcaacgatttgcgccaaggagatgtgatcctcttcactcagaacaattac
gagaaaggcattcaaaatggctcgctcggaacgctaactcgcgctgtcggggctggagat
gactacggagtggttgaactggacacaggcgagagcgtgtatgtcacccaatccctgctg
gactgtatgaggctgggctactgcatcacactccataaagctcagggttcgcagttccca
cgcatcatcatcgcgctgcaaaaggggaggatcgttgacagggcctggctctataccgca
ataaccagggccgagcatgaggtccatatcgtgggcagcacagctgagtttgcagccatc
accaaagcgcccagcaatgcccataaccggaacagctatctgcgtgatctgttgaagaaa
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (20)   
   Pfam (20)   
All databases (29)   

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