KEGG   Aeromonas hydrophila AH10: VU14_11805
Entry
VU14_11805        CDS       T03886                                 
Name
(GenBank) RNA helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
ahi  Aeromonas hydrophila AH10
Pathway
ahi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ahi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VU14_11805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ahi03019]
    VU14_11805
Enzymes [BR:ahi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     VU14_11805
Messenger RNA biogenesis [BR:ahi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     VU14_11805
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 P-loop_SecA Flavi_DEAD
Other DBs
NCBI-ProteinID: AKA17513
UniProt: A0A1V2F1Y8
Position
complement(2635643..2637043)
AA seq 466 aa
MSFTSLGLAEPLLRAVAEQGYDTPSPIQQQAIPAVLAGRDLMAAAQTGTGKTAGFTLPML
QRLTESKRKVSPNRIRALVLTPTRELAAQVGESVRNYGKHLPIRSHVVFGGVSINPQMMA
TRRGLDVLVACPGRLMDLYNQNAVKFDEVEILVLDEADRMLDMGFIRDIRRILALLPKKR
QNLLFSATFADEIRELATGLLDNPAVIEVTPRNSTAERIEQLVHPCDKANKIALLSHLVT
SNNWQQVLVFTRTKHMANRVAETLDKNGVSAAAIHGNKSQGARTRALAGFKDGSVKVLVA
TDIAARGLDIDKLPQVVNFELPNVAEDYVHRIGRTGRAGAAGHAISLVAADEGKLIKAIE
RLTKQNIPCEQVAGFEASRETLDNIARGIGAPLRKEPRDPSEQRRAPRPQGQGQRQGAGR
SANGGNGGGNRSGNGGKPKPQGGQRPEGGAGKPAQARRPRRATHNQ
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgagttttacttccctcggtctggccgaacccttgttgcgtgccgttgccgagcaaggc
tacgacaccccgtctcccattcagcaacaagcgatcccggcggtactggctggccgtgat
ctgatggccgccgcccagaccgggaccggcaagaccgcaggttttaccctgccgatgctg
cagcgtctgactgaaagcaagcgcaaggtctccccgaatcgcatccgtgccctggtgctg
accccgacccgcgagctggccgcccaggtgggcgagagcgtgcgcaactacggcaaacac
ctgccgatccgcagccacgtggtatttggcggcgtgagcatcaacccgcagatgatggcc
acccgccgtggtctggacgtgctggtggcctgcccgggccgcctgatggatctctacaac
cagaacgccgtcaagttcgacgaagtggaaatcctggtgctggacgaagcggatcgcatg
ctcgacatgggctttatccgcgacatccgccgcatcctggccctgctgccgaagaagcgc
cagaacctgctgttctccgctacctttgccgacgagatccgcgagctggccaccggcctg
ctggacaacccggcggtgatcgaagtcaccccgcgcaacagcaccgccgagcgtatcgag
cagctggtgcacccgtgcgacaaggccaacaagattgccctgctgagtcacctggtcacc
agcaacaactggcagcaggtgttggtgttcacccgtaccaagcacatggccaaccgcgtt
gccgagaccctcgacaagaacggcgtcagcgccgccgccattcacggcaacaagagccag
ggtgcccgcacccgcgccctggccggtttcaaggatggcagcgtcaaggtgctggtggcg
accgacatcgccgcccgtggtctggacatcgacaagctgccgcaggtagtcaacttcgag
ttgccgaacgtggctgaagattacgtgcaccgtatcggtcgtaccggccgtgccggcgct
gccggtcatgccatctccctggttgctgccgatgaaggcaagctcatcaaggccatcgag
cggctgaccaagcagaacattccctgcgagcaggtggccggttttgaagcctcccgcgag
accctcgataacatcgcccgtggcatcggtgcgccgctgcgcaaagagccgcgcgatcca
agcgagcagcgccgtgcgccgcgcccgcaaggtcaaggccagcgtcagggcgccggtcgc
tctgccaacggtggcaatggcggcggtaaccgctccggcaacggtggcaagcccaagccc
caaggtggccagcgtccggaaggcggcgccggcaaaccggctcaggcccgtcgtcctcgt
cgtgctacccacaaccagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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